Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq3816 149 2e-33 seq1834 149 2e-33 seq4665 141 2e-31 seq4167 102 2e-19 seq2760 102 2e-19 seq2036 102 2e-19 >seq3816 Length=5097 Score = 149 bits (164), Expect = 2e-33 Identities = 193/265 (73%), Gaps = 4/265 (2%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||||| ||||| ||||| | || ||| ||||||| | ||||||| Sbjct 1049 ATCTTCACAGACATTTCTATTTCGCCGAATCTTTTTCCAAGACAGCATCCAAGTCGTTAC 1108 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1109 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 1168 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAA 194 ||||| |||||||||||| || |||| || || | || ||| | | | Sbjct 1169 GTTACAGCCGCCGTTTACTGGAGCTT--ATAAAAATATTATAATTA--TCAATATTTTTT 1224 Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 ||||| | || |||| ||||||| |||| ||| ||| | || || || ||| Sbjct 1225 TTAACTTACCAGCACTGGGCAGGTGTCAGCCCCCTTACATTGTAATTACACTTAGCGGAG 1284 Query 255 TGCTGTGTTTTTAATAAACAGTCGC 279 ||||||||| |||||||||||| Sbjct 1285 ACTTGTGTTTTTGATAAACAGTCGC 1309 >seq1834 Length=313589 Score = 149 bits (164), Expect = 2e-33 Identities = 193/265 (73%), Gaps = 4/265 (2%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||||| ||||| ||||| | || ||| ||||||| | ||||||| Sbjct 122048 ATCTTCACAGACATTTCTATTTCGCCGAATCTTTTTCCAAGACAGCATCCAAGTCGTTAC 122107 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 122108 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 122167 Query 135 GTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCAA 194 ||||| |||||||||||| || |||| || || | || ||| | | | Sbjct 122168 GTTACAGCCGCCGTTTACTGGAGCTT--ATAAAAATATTATAATTA--TCAATATTTTTT 122223 Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 ||||| | || |||| ||||||| |||| ||| ||| | || || || ||| Sbjct 122224 TTAACTTACCAGCACTGGGCAGGTGTCAGCCCCCTTACATTGTAATTACACTTAGCGGAG 122283 Query 255 TGCTGTGTTTTTAATAAACAGTCGC 279 ||||||||| |||||||||||| Sbjct 122284 ACTTGTGTTTTTGATAAACAGTCGC 122308 >seq4665 Length=34750 Score = 141 bits (156), Expect = 2e-31 Identities = 193/266 (73%), Gaps = 5/266 (2%) Strand=Plus/Minus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||||| ||||| ||||| | || ||| ||||||| | ||||||| Sbjct 4313 ATCTTCACAGACATTTCTATTTCGCCGAATCTTTTTCCAAGACAGCATCCAAGTCGTTAC 4254 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 4253 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 4194 Query 135 GTTAC-GGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCA 193 ||||| | ||||||||||| || |||| || || | || ||| | | | Sbjct 4193 GTTACAGCCCGCCGTTTACTGGAGCTT--ATAAAAATATTATAATTA--TCAATATTTTT 4138 Query 194 ATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGA 253 ||||| | || |||| ||||||| |||| ||| ||| | || || || || Sbjct 4137 TTTAACTTACCAGCACTGGGCAGGTGTCAGCCCCCTTACATTGTAATTACACTTAGCGGA 4078 Query 254 GTGCTGTGTTTTTAATAAACAGTCGC 279 | ||||||||| |||||||||||| Sbjct 4077 GACTTGTGTTTTTGATAAACAGTCGC 4052 Score = 141 bits (156), Expect = 2e-31 Identities = 193/266 (73%), Gaps = 5/266 (2%) Strand=Plus/Plus Query 15 ATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTAC 74 |||||||||| ||||| ||||| | || ||| ||||||| | ||||||| Sbjct 30409 ATCTTCACAGACATTTCTATTTCGCCGAATCTTTTTCCAAGACAGCATCCAAGTCGTTAC 30468 Query 75 GCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATT 134 || |||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 30469 ACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTTGGACCGTTATA 30528 Query 135 GTTAC-GGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATCA 193 ||||| | ||||||||||| || |||| || || | || ||| | | | Sbjct 30529 GTTACAGCCCGCCGTTTACTGGAGCTT--ATAAAAATATTATAATTA--TCAATATTTTT 30584 Query 194 ATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGA 253 ||||| | || |||| ||||||| |||| ||| ||| | || || || || Sbjct 30585 TTTAACTTACCAGCACTGGGCAGGTGTCAGCCCCCTTACATTGTAATTACACTTAGCGGA 30644 Query 254 GTGCTGTGTTTTTAATAAACAGTCGC 279 | ||||||||| |||||||||||| Sbjct 30645 GACTTGTGTTTTTGATAAACAGTCGC 30670 >seq4167 Length=2538 Score = 102 bits (112), Expect = 2e-19 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||| ||||| |||||||||||||||||| |||||||| |||| Sbjct 865 TCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTGGAC 924 Query 128 CGTTATTGTTACGGCCGCCGTTTACC 153 ||| | |||| ||||||||||||| Sbjct 925 CGTCA-GATTACAGCCGCCGTTTACC 949 >seq2760 Length=14445 Score = 102 bits (112), Expect = 2e-19 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||| ||||| |||||||||||||||||| |||||||| |||| Sbjct 1725 TCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTGGAC 1666 Query 128 CGTTATTGTTACGGCCGCCGTTTACC 153 ||| | |||| ||||||||||||| Sbjct 1665 CGTCA-GATTACAGCCGCCGTTTACC 1641 Score = 102 bits (112), Expect = 2e-19 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||| ||||| |||||||||||||||||| |||||||| |||| Sbjct 7937 TCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTGGAC 7878 Query 128 CGTTATTGTTACGGCCGCCGTTTACC 153 ||| | |||| ||||||||||||| Sbjct 7877 CGTCA-GATTACAGCCGCCGTTTACC 7853 Score = 102 bits (112), Expect = 2e-19 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||| ||||| |||||||||||||||||| |||||||| |||| Sbjct 14148 TCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTGGAC 14089 Query 128 CGTTATTGTTACGGCCGCCGTTTACC 153 ||| | |||| ||||||||||||| Sbjct 14088 CGTCA-GATTACAGCCGCCGTTTACC 14064 >seq2036 Length=3771 Score = 102 bits (112), Expect = 2e-19 Identities = 75/86 (87%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 68 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 127 ||||||| |||||| |||||| ||||| |||||||||||||||||| |||||||| |||| Sbjct 3456 TCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATTTTGCTACCTTTGGAC 3397 Query 128 CGTTATTGTTACGGCCGCCGTTTACC 153 ||| | |||| ||||||||||||| Sbjct 3396 CGTCA-GATTACAGCCGCCGTTTACC 3372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260741183680