Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2830 311 1e-82 seq2729 311 1e-82 seq2511 311 1e-82 seq2075 311 1e-82 seq1943 311 1e-82 seq389 311 1e-82 seq912 87.8 3e-15 >seq2830 Length=2012 Score = 311 bits (344), Expect = 1e-82 Identities = 225/259 (87%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 441 ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGA 500 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | ||||||||||||||| | | Sbjct 501 CCTGTTATTGCCTCAAACTTCCTTGCGTTAGACACGCAAAGTCCCTCTAAGAAGTGATAC 560 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | |||| | ||| || |||||||||||| |||||||||||||||||||| |||| Sbjct 561 AGTAACCGCAAAGTTACTGACCCTATTTAGCAGGCTAAGGTCTCGTTCGTTATCGAAATT 620 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 621 AACCAGACAGATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 680 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 681 AAAGAGCTATCAATCTGTC 699 >seq2729 Length=19671 Score = 311 bits (344), Expect = 1e-82 Identities = 225/259 (87%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 7910 ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGA 7969 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | ||||||||||||||| | | Sbjct 7970 CCTGTTATTGCCTCAAACTTCCTTGCGTTAGACACGCAAAGTCCCTCTAAGAAGTGATAC 8029 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | |||| | ||| || |||||||||||| |||||||||||||||||||| |||| Sbjct 8030 AGTAACCGCAAAGTTACTGACCCTATTTAGCAGGCTAAGGTCTCGTTCGTTATCGAAATT 8089 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 8090 AACCAGACAGATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 8149 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 8150 AAAGAGCTATCAATCTGTC 8168 >seq2511 Length=2328 Score = 311 bits (344), Expect = 1e-82 Identities = 225/259 (87%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 458 ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGA 399 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | ||||||||||||||| | | Sbjct 398 CCTGTTATTGCCTCAAACTTCCTTGCGTTAGACACGCAAAGTCCCTCTAAGAAGTGATAC 339 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | |||| | ||| || |||||||||||| |||||||||||||||||||| |||| Sbjct 338 AGTAACCGCAAAGTTACTGACCCTATTTAGCAGGCTAAGGTCTCGTTCGTTATCGAAATT 279 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 278 AACCAGACAGATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 219 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 218 AAAGAGCTATCAATCTGTC 200 >seq2075 Length=3612 Score = 311 bits (344), Expect = 1e-82 Identities = 225/259 (87%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 458 ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGA 399 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | ||||||||||||||| | | Sbjct 398 CCTGTTATTGCCTCAAACTTCCTTGCGTTAGACACGCAAAGTCCCTCTAAGAAGTGATAC 339 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | |||| | ||| || |||||||||||| |||||||||||||||||||| |||| Sbjct 338 AGTAACCGCAAAGTTACTGACCCTATTTAGCAGGCTAAGGTCTCGTTCGTTATCGAAATT 279 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 278 AACCAGACAGATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 219 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 218 AAAGAGCTATCAATCTGTC 200 >seq1943 Length=707543 Score = 311 bits (344), Expect = 1e-82 Identities = 225/259 (87%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 543845 ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGA 543786 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | ||||||||||||||| | | Sbjct 543785 CCTGTTATTGCCTCAAACTTCCTTGCGTTAGACACGCAAAGTCCCTCTAAGAAGTGATAC 543726 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | |||| | ||| || |||||||||||| |||||||||||||||||||| |||| Sbjct 543725 AGTAACCGCAAAGTTACTGACCCTATTTAGCAGGCTAAGGTCTCGTTCGTTATCGAAATT 543666 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 543665 AACCAGACAGATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 543606 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 543605 AAAGAGCTATCAATCTGTC 543587 >seq389 Length=1148824 Score = 311 bits (344), Expect = 1e-82 Identities = 225/259 (87%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 975720 ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGA 975661 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | ||||||||||||||| | | Sbjct 975660 CCTGTTATTGCCTCAAACTTCCTTGCGTTAGACACGCAAAGTCCCTCTAAGAAGTGATAC 975601 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | |||| | ||| || |||||||||||| |||||||||||||||||||| |||| Sbjct 975600 AGTAACCGCAAAGTTACTGACCCTATTTAGCAGGCTAAGGTCTCGTTCGTTATCGAAATT 975541 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 975540 AACCAGACAGATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 975481 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 975480 AAAGAGCTATCAATCTGTC 975462 Score = 307 bits (340), Expect = 2e-81 Identities = 224/259 (86%), Gaps = 2/259 (1%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | |||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 948139 ACTCGTTGCATGCATCAGTGTAGCGCGCGTGCAGCCCAGAACATCTAAGGGCATCACAGA 948080 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||||||||||| | | | || | | ||||||||||||||| | | Sbjct 948079 CCTGTTATTGCCTCAAACTTCCTTGCGTTAGACACGCAAAGTCCCTCTAAGAAGTGATAC 948020 Query 122 ACCAACC--ATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATT 179 | |||| | ||| || |||||||||||| |||||||||||||||||||| |||| Sbjct 948019 AGTAACCGCAAAGTTACTGACCCTATTTAGCAGGCTAAGGTCTCGTTCGTTATCGAAATT 947960 Query 180 AACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAG 239 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 947959 AACCAGACAGATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATGAAG 947900 Query 240 AAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| Sbjct 947899 AAAGAGCTATCAATCTGTC 947881 >seq912 Length=352595 Score = 87.8 bits (96), Expect = 3e-15 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || | | || || ||||||||||| ||||||| |||||| | | ||||||| Sbjct 284281 ACTCGTTGCATGCATCGGTTAAGCGCGCGTGCAGCCCAGACCATCTACAGCCGTCACAGA 284340 Query 62 CCTGTTATTGCCTCAAACTTCCA 84 ||||||||||||||||||||||| Sbjct 284341 CCTGTTATTGCCTCAAACTTCCA 284363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796763990865