Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq4665 111 3e-22 seq3816 111 3e-22 seq1834 111 3e-22 >seq4665 Length=34750 Score = 111 bits (122), Expect = 3e-22 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 ||| |||| ||| ||||| || |||||||||||| ||||||||||||||| ||| | | Sbjct 1387 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 1446 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 | | ||| | ||| |||| ||| || |||||||| ||| ||| |||| ||||||| || Sbjct 1447 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAGT 1506 Query 167 GAGCCATTACCTCACCAACTAGCTAATCCGA 197 | ||| | || |||||||||||| || Sbjct 1507 AAATTTTTATATTACTAACTAGCTAATCAGA 1537 Score = 111 bits (122), Expect = 3e-22 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 ||| |||| ||| ||||| || |||||||||||| ||||||||||||||| ||| | | Sbjct 33335 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 33276 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 | | ||| | ||| |||| ||| || |||||||| ||| ||| |||| ||||||| || Sbjct 33275 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAGT 33216 Query 167 GAGCCATTACCTCACCAACTAGCTAATCCGA 197 | ||| | || |||||||||||| || Sbjct 33215 AAATTTTTATATTACTAACTAGCTAATCAGA 33185 >seq3816 Length=5097 Score = 111 bits (122), Expect = 3e-22 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 ||| |||| ||| ||||| || |||||||||||| ||||||||||||||| ||| | | Sbjct 3972 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 3913 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 | | ||| | ||| |||| ||| || |||||||| ||| ||| |||| ||||||| || Sbjct 3912 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAGT 3853 Query 167 GAGCCATTACCTCACCAACTAGCTAATCCGA 197 | ||| | || |||||||||||| || Sbjct 3852 AAATTTTTATATTACTAACTAGCTAATCAGA 3822 >seq1834 Length=313589 Score = 111 bits (122), Expect = 3e-22 Identities = 115/151 (76%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 47 TCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 106 ||| |||| ||| ||||| || |||||||||||| ||||||||||||||| ||| | | Sbjct 115419 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 115360 Query 107 TGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGT 166 | | ||| | ||| |||| ||| || |||||||| ||| ||| |||| ||||||| || Sbjct 115359 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAGT 115300 Query 167 GAGCCATTACCTCACCAACTAGCTAATCCGA 197 | ||| | || |||||||||||| || Sbjct 115299 AAATTTTTATATTACTAACTAGCTAATCAGA 115269 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071949991200