Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq4665 84.2 5e-14 seq3816 84.2 5e-14 seq1834 84.2 5e-14 >seq4665 Length=34750 Score = 84.2 bits (92), Expect = 5e-14 Identities = 73/88 (83%), Gaps = 2/88 (2%) Strand=Plus/Minus Query 274 TTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTA 333 ||||| | ||| ||||||| |||| ||||||| ||||||| ||||||||| ||||||||| Sbjct 2896 TTTCATGTTCT-TTTCACTTCCCT-TCCGGGGATCTTTTCACCTTTCCCTTACGGTACTA 2839 Query 334 GTTCACTATCGGTCAGTCAGTAGTATTT 361 || |||||||| ||| | ||||||| Sbjct 2838 GTCCACTATCGATCACTTTAAAGTATTT 2811 Score = 84.2 bits (92), Expect = 5e-14 Identities = 73/88 (83%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 274 TTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTA 333 ||||| | ||| ||||||| |||| ||||||| ||||||| ||||||||| ||||||||| Sbjct 31826 TTTCATGTTCT-TTTCACTTCCCT-TCCGGGGATCTTTTCACCTTTCCCTTACGGTACTA 31883 Query 334 GTTCACTATCGGTCAGTCAGTAGTATTT 361 || |||||||| ||| | ||||||| Sbjct 31884 GTCCACTATCGATCACTTTAAAGTATTT 31911 >seq3816 Length=5097 Score = 84.2 bits (92), Expect = 5e-14 Identities = 73/88 (83%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 274 TTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTA 333 ||||| | ||| ||||||| |||| ||||||| ||||||| ||||||||| ||||||||| Sbjct 2462 TTTCATGTTCT-TTTCACTTCCCT-TCCGGGGATCTTTTCACCTTTCCCTTACGGTACTA 2519 Query 334 GTTCACTATCGGTCAGTCAGTAGTATTT 361 || |||||||| ||| | ||||||| Sbjct 2520 GTCCACTATCGATCACTTTAAAGTATTT 2547 >seq1834 Length=313589 Score = 84.2 bits (92), Expect = 5e-14 Identities = 73/88 (83%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 274 TTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTA 333 ||||| | ||| ||||||| |||| ||||||| ||||||| ||||||||| ||||||||| Sbjct 113909 TTTCATGTTCT-TTTCACTTCCCT-TCCGGGGATCTTTTCACCTTTCCCTTACGGTACTA 113966 Query 334 GTTCACTATCGGTCAGTCAGTAGTATTT 361 || |||||||| ||| | ||||||| Sbjct 113967 GTCCACTATCGATCACTTTAAAGTATTT 113994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241542079360