Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq4665 105 1e-20 seq3816 105 1e-20 seq1834 105 1e-20 >seq4665 Length=34750 Score = 105 bits (116), Expect = 1e-20 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||| | || | | ||||| || || ||||||||| ||||||||||||||| ||||| | Sbjct 1387 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 1446 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 | | ||| |||||||||||| | || |||||||| | ||||| |||| ||| ||| || Sbjct 1447 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAGT 1506 Query 133 GGGCTATTATCTCACCAACTACCTAATC 160 | |||| | || ||||| |||||| Sbjct 1507 AAATTTTTATATTACTAACTAGCTAATC 1534 Score = 105 bits (116), Expect = 1e-20 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||| | || | | ||||| || || ||||||||| ||||||||||||||| ||||| | Sbjct 33335 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 33276 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 | | ||| |||||||||||| | || |||||||| | ||||| |||| ||| ||| || Sbjct 33275 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAGT 33216 Query 133 GGGCTATTATCTCACCAACTACCTAATC 160 | |||| | || ||||| |||||| Sbjct 33215 AAATTTTTATATTACTAACTAGCTAATC 33188 >seq3816 Length=5097 Score = 105 bits (116), Expect = 1e-20 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||| | || | | ||||| || || ||||||||| ||||||||||||||| ||||| | Sbjct 3972 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 3913 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 | | ||| |||||||||||| | || |||||||| | ||||| |||| ||| ||| || Sbjct 3912 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAGT 3853 Query 133 GGGCTATTATCTCACCAACTACCTAATC 160 | |||| | || ||||| |||||| Sbjct 3852 AAATTTTTATATTACTAACTAGCTAATC 3825 >seq1834 Length=313589 Score = 105 bits (116), Expect = 1e-20 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 13 TCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCG 72 ||| | || | | ||||| || || ||||||||| ||||||||||||||| ||||| | Sbjct 115419 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 115360 Query 73 TGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGT 132 | | ||| |||||||||||| | || |||||||| | ||||| |||| ||| ||| || Sbjct 115359 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCTTAGT 115300 Query 133 GGGCTATTATCTCACCAACTACCTAATC 160 | |||| | || ||||| |||||| Sbjct 115299 AAATTTTTATATTACTAACTAGCTAATC 115272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998353424640