Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq2830 105 8e-21 seq2729 105 8e-21 seq1943 105 8e-21 seq389 105 8e-21 seq2470 102 1e-19 >seq2830 Length=2012 Score = 105 bits (116), Expect = 8e-21 Identities = 90/107 (84%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 ||||||||||||||||||| || | ||||||| |||||||||||||| |||||| Sbjct 1085 CTAGAAACCAACAAAATAGAACCG-AGGTCCTATCTTATTATTCCATGCTGCAGTATTCA 1143 Query 65 GGGCG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||| |||||||||| ||||||||| ||||||||| |||||||| Sbjct 1144 GGGCGACAAGCCTGCTTGAAACACTCTATTTTTCTCAAAGTAAAAGT 1190 >seq2729 Length=19671 Score = 105 bits (116), Expect = 8e-21 Identities = 90/107 (84%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 ||||||||||||||||||| || | ||||||| |||||||||||||| |||||| Sbjct 8554 CTAGAAACCAACAAAATAGAACCG-AGGTCCTATCTTATTATTCCATGCTGCAGTATTCA 8612 Query 65 GGGCG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||| |||||||||| ||||||||| ||||||||| |||||||| Sbjct 8613 GGGCGACAAGCCTGCTTGAAACACTCTATTTTTCTCAAAGTAAAAGT 8659 >seq1943 Length=707543 Score = 105 bits (116), Expect = 8e-21 Identities = 90/107 (84%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 ||||||||||||||||||| || | ||||||| |||||||||||||| |||||| Sbjct 543201 CTAGAAACCAACAAAATAGAACCG-AGGTCCTATCTTATTATTCCATGCTGCAGTATTCA 543143 Query 65 GGGCG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||| |||||||||| ||||||||| ||||||||| |||||||| Sbjct 543142 GGGCGACAAGCCTGCTTGAAACACTCTATTTTTCTCAAAGTAAAAGT 543096 >seq389 Length=1148824 Score = 105 bits (116), Expect = 8e-21 Identities = 90/107 (84%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 ||||||||||||||||||| || | ||||||| |||||||||||||| |||||| Sbjct 947495 CTAGAAACCAACAAAATAGAACCG-AGGTCCTATCTTATTATTCCATGCTGCAGTATTCA 947437 Query 65 GGGCG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||| |||||||||| ||||||||| ||||||||| |||||||| Sbjct 947436 GGGCGACAAGCCTGCTTGAAACACTCTATTTTTCTCAAAGTAAAAGT 947390 Score = 105 bits (116), Expect = 8e-21 Identities = 90/107 (84%), Gaps = 3/107 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 ||||||||||||||||||| || | ||||||| |||||||||||||| |||||| Sbjct 975076 CTAGAAACCAACAAAATAGAACCG-AGGTCCTATCTTATTATTCCATGCTGCAGTATTCA 975018 Query 65 GGGCG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||| |||||||||| ||||||||| ||||||||| |||||||| Sbjct 975017 GGGCGACAAGCCTGCTTGAAACACTCTATTTTTCTCAAAGTAAAAGT 974971 >seq2470 Length=2555 Score = 102 bits (112), Expect = 1e-19 Identities = 89/107 (83%), Gaps = 3/107 (3%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC- 64 |||||||||||||||||| | || | ||||||| |||||||||||| | |||||| Sbjct 30 CTAGAAACCAACAAAATA-GAACCGAGGTCCTATCTTATTATTCCATGGTGCAGTATTCA 88 Query 65 GGGCG-TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGT 110 ||||| |||||||||| ||||||||| ||||||||| |||||||| Sbjct 89 GGGCGACAAGCCTGCTTGAAACACTCTATTTTTCTCAAAGTAAAAGT 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595173101610