Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq4665 86.0 1e-14 seq3816 86.0 1e-14 seq1834 86.0 1e-14 >seq4665 Length=34750 Score = 86.0 bits (94), Expect = 1e-14 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| | |||||| |||| ||| ||||||||||||||| || ||| ||||| Sbjct 1208 CCACCTACATACGCTTTACGCCCAGTAATTCCGGATAACGCTTGTATCCCCCGTTTTACC 1267 Query 248 GCGGCTGCTGGCACGTAGTTAGCCG 272 ||||||||||||||| |||| |||| Sbjct 1268 GCGGCTGCTGGCACGGAGTTTGCCG 1292 Score = 86.0 bits (94), Expect = 1e-14 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| | |||||| |||| ||| ||||||||||||||| || ||| ||||| Sbjct 33514 CCACCTACATACGCTTTACGCCCAGTAATTCCGGATAACGCTTGTATCCCCCGTTTTACC 33455 Query 248 GCGGCTGCTGGCACGTAGTTAGCCG 272 ||||||||||||||| |||| |||| Sbjct 33454 GCGGCTGCTGGCACGGAGTTTGCCG 33430 >seq3816 Length=5097 Score = 86.0 bits (94), Expect = 1e-14 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| | |||||| |||| ||| ||||||||||||||| || ||| ||||| Sbjct 4151 CCACCTACATACGCTTTACGCCCAGTAATTCCGGATAACGCTTGTATCCCCCGTTTTACC 4092 Query 248 GCGGCTGCTGGCACGTAGTTAGCCG 272 ||||||||||||||| |||| |||| Sbjct 4091 GCGGCTGCTGGCACGGAGTTTGCCG 4067 >seq1834 Length=313589 Score = 86.0 bits (94), Expect = 1e-14 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| | |||||| |||| ||| ||||||||||||||| || ||| ||||| Sbjct 115598 CCACCTACATACGCTTTACGCCCAGTAATTCCGGATAACGCTTGTATCCCCCGTTTTACC 115539 Query 248 GCGGCTGCTGGCACGTAGTTAGCCG 272 ||||||||||||||| |||| |||| Sbjct 115538 GCGGCTGCTGGCACGGAGTTTGCCG 115514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828762544715