Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq2830 156 4e-36 seq2729 156 4e-36 seq1943 156 4e-36 seq389 156 4e-36 seq2470 118 1e-24 >seq2830 Length=2012 Score = 156 bits (172), Expect = 4e-36 Identities = 148/184 (80%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTACC 67 ||||||||||||| |||| ||||| ||| |||||||| | | || | |||||| | | Sbjct 1190 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGC 1131 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 ||||||||||| ||||||| | |||||||||||||| ||||||||||||| ||||| Sbjct 1130 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAG-GTAAT 1073 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||| ||| ||||| | ||||| || ||||| ||||||||||||| |||| Sbjct 1072 GATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATT 1013 Query 188 TATT 191 | || Sbjct 1012 TGTT 1009 >seq2729 Length=19671 Score = 156 bits (172), Expect = 4e-36 Identities = 148/184 (80%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTACC 67 ||||||||||||| |||| ||||| ||| |||||||| | | || | |||||| | | Sbjct 8659 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGC 8600 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 ||||||||||| ||||||| | |||||||||||||| ||||||||||||| ||||| Sbjct 8599 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAG-GTAAT 8542 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||| ||| ||||| | ||||| || ||||| ||||||||||||| |||| Sbjct 8541 GATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATT 8482 Query 188 TATT 191 | || Sbjct 8481 TGTT 8478 >seq1943 Length=707543 Score = 156 bits (172), Expect = 4e-36 Identities = 148/184 (80%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTACC 67 ||||||||||||| |||| ||||| ||| |||||||| | | || | |||||| | | Sbjct 543096 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGC 543155 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 ||||||||||| ||||||| | |||||||||||||| ||||||||||||| ||||| Sbjct 543156 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAG-GTAAT 543213 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||| ||| ||||| | ||||| || ||||| ||||||||||||| |||| Sbjct 543214 GATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATT 543273 Query 188 TATT 191 | || Sbjct 543274 TGTT 543277 >seq389 Length=1148824 Score = 156 bits (172), Expect = 4e-36 Identities = 148/184 (80%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTACC 67 ||||||||||||| |||| ||||| ||| |||||||| | | || | |||||| | | Sbjct 947390 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGC 947449 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 ||||||||||| ||||||| | |||||||||||||| ||||||||||||| ||||| Sbjct 947450 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAG-GTAAT 947507 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||| ||| ||||| | ||||| || ||||| ||||||||||||| |||| Sbjct 947508 GATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATT 947567 Query 188 TATT 191 | || Sbjct 947568 TGTT 947571 Score = 156 bits (172), Expect = 4e-36 Identities = 148/184 (80%), Gaps = 4/184 (2%) Strand=Plus/Plus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTACC 67 ||||||||||||| |||| ||||| ||| |||||||| | | || | |||||| | | Sbjct 974971 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCAGC 975030 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 ||||||||||| ||||||| | |||||||||||||| ||||||||||||| ||||| Sbjct 975031 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACCAAG-GTAAT 975088 Query 128 GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATT 187 ||| |||| ||| ||| ||||| | ||||| || ||||| ||||||||||||| |||| Sbjct 975089 GATTAATAGGGACAGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTAGATT 975148 Query 188 TATT 191 | || Sbjct 975149 TGTT 975152 >seq2470 Length=2555 Score = 118 bits (130), Expect = 1e-24 Identities = 111/136 (82%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 10 ACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTC-GAATACATTACC 67 ||||||||||||| |||| ||||| ||| |||||||| | | || | |||||| ||| Sbjct 135 ACTTTTACTTTGAGAAAAATAGAGTGTTTCAAGCAGGCTTGTCGCCCTGAATACTGCACC 76 Query 68 ATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAAT 127 ||||||||||| ||||||| | |||||||||||||| ||||||||||||| ||||| Sbjct 75 ATGGAATAATAAGATAGGACCT-CGGTTCTATTTTGTTGGTTTCTAGGACC-AAGGTAAT 18 Query 128 GATAAATACGGATAGT 143 ||| |||| ||| ||| Sbjct 17 GATTAATAGGGACAGT 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511976861600