Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq4665 111 4e-22 seq3816 111 4e-22 seq1834 111 4e-22 >seq4665 Length=34750 Score = 111 bits (122), Expect = 4e-22 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 48 TCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 107 ||| |||||||| ||||| || |||||||||||| ||||||||||||||| ||| | | Sbjct 1387 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 1446 Query 108 TGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCT 163 | | ||| | ||| ||||||||||| |||||||| |||||| |||| |||||| Sbjct 1447 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCT 1502 Score = 111 bits (122), Expect = 4e-22 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 48 TCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 107 ||| |||||||| ||||| || |||||||||||| ||||||||||||||| ||| | | Sbjct 33335 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 33276 Query 108 TGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCT 163 | | ||| | ||| ||||||||||| |||||||| |||||| |||| |||||| Sbjct 33275 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCT 33220 >seq3816 Length=5097 Score = 111 bits (122), Expect = 4e-22 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 48 TCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 107 ||| |||||||| ||||| || |||||||||||| ||||||||||||||| ||| | | Sbjct 3972 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 3913 Query 108 TGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCT 163 | | ||| | ||| ||||||||||| |||||||| |||||| |||| |||||| Sbjct 3912 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCT 3857 >seq1834 Length=313589 Score = 111 bits (122), Expect = 4e-22 Identities = 94/116 (81%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 48 TCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCG 107 ||| |||||||| ||||| || |||||||||||| ||||||||||||||| ||| | | Sbjct 115419 TCAAGCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTG 115360 Query 108 TGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCT 163 | | ||| | ||| ||||||||||| |||||||| |||||| |||| |||||| Sbjct 115359 TATTTCAATCCCAATGTGGCTGGTCCCCCTCTCAGGGCAGCTACTGATCTTCGCCT 115304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222342975040