Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq2830 264 2e-68 seq2729 264 2e-68 seq2511 264 2e-68 seq1943 264 2e-68 seq389 264 2e-68 seq2075 248 2e-63 seq912 122 2e-25 >seq2830 Length=2012 Score = 264 bits (292), Expect = 2e-68 Identities = 252/317 (79%), Gaps = 14/317 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG---CTTTGGCGGGTCGCCGG----C 72 || |||||||||| |||||||||||| || | | ||||| ||| | | | Sbjct 608 GAACGAGACCTTAGCCTGCTAAATAG---GGTCAGTAACTTTGC--GGTTACTGTATCAC 554 Query 73 TTCTTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| | || || | | | ||||||||||||||||||||||||||||| Sbjct 553 TTCTTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGA 494 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||||||||||||| |||||||||||||||||| | ||||||||| | || Sbjct 493 TGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATGCAACGAGTTTTT-AC 435 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||||||| |||||||||||||||| | | | ||||| |||||||||| ||||| Sbjct 434 CTTGGCCGACAGGTCTGGGTAATCTTTTGAGTGTGCATCGTGATGGGGATAGATTATTGC 375 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| ||||||||||||||||||||||| |||| |||| |||| ||| ||||| Sbjct 374 AATTATTAATCTTCAACGAGGAATGCCTAGTAGGCGCAAGTCAGCAGCTTGCGCCGATTA 315 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||| ||||| Sbjct 314 AGTCCCTGCCTCTTGTA 298 >seq2729 Length=19671 Score = 264 bits (292), Expect = 2e-68 Identities = 252/317 (79%), Gaps = 14/317 (4%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG---CTTTGGCGGGTCGCCGG----C 72 || |||||||||| |||||||||||| || | | ||||| ||| | | | Sbjct 8077 GAACGAGACCTTAGCCTGCTAAATAG---GGTCAGTAACTTTGC--GGTTACTGTATCAC 8023 Query 73 TTCTTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| | || || | | | ||||||||||||||||||||||||||||| Sbjct 8022 TTCTTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGA 7963 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||||||||||||| |||||||||||||||||| | ||||||||| | || Sbjct 7962 TGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATGCAACGAGTTTTT-AC 7904 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||||||| |||||||||||||||| | | | ||||| |||||||||| ||||| Sbjct 7903 CTTGGCCGACAGGTCTGGGTAATCTTTTGAGTGTGCATCGTGATGGGGATAGATTATTGC 7844 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| ||||||||||||||||||||||| |||| |||| |||| ||| ||||| Sbjct 7843 AATTATTAATCTTCAACGAGGAATGCCTAGTAGGCGCAAGTCAGCAGCTTGCGCCGATTA 7784 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||| ||||| Sbjct 7783 AGTCCCTGCCTCTTGTA 7767 >seq2511 Length=2328 Score = 264 bits (292), Expect = 2e-68 Identities = 252/317 (79%), Gaps = 14/317 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG---CTTTGGCGGGTCGCCGG----C 72 || |||||||||| |||||||||||| || | | ||||| ||| | | | Sbjct 291 GAACGAGACCTTAGCCTGCTAAATAG---GGTCAGTAACTTTGC--GGTTACTGTATCAC 345 Query 73 TTCTTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| | || || | | | ||||||||||||||||||||||||||||| Sbjct 346 TTCTTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGA 405 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||||||||||||| |||||||||||||||||| | ||||||||| | || Sbjct 406 TGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATGCAACGAGTTTTT-AC 464 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||||||| |||||||||||||||| | | | ||||| |||||||||| ||||| Sbjct 465 CTTGGCCGACAGGTCTGGGTAATCTTTTGAGTGTGCATCGTGATGGGGATAGATTATTGC 524 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| ||||||||||||||||||||||| |||| |||| |||| ||| ||||| Sbjct 525 AATTATTAATCTTCAACGAGGAATGCCTAGTAGGCGCAAGTCAGCAGCTTGCGCCGATTA 584 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||| ||||| Sbjct 585 AGTCCCTGCCTCTTGTA 601 >seq1943 Length=707543 Score = 264 bits (292), Expect = 2e-68 Identities = 252/317 (79%), Gaps = 14/317 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG---CTTTGGCGGGTCGCCGG----C 72 || |||||||||| |||||||||||| || | | ||||| ||| | | | Sbjct 543678 GAACGAGACCTTAGCCTGCTAAATAG---GGTCAGTAACTTTGC--GGTTACTGTATCAC 543732 Query 73 TTCTTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| | || || | | | ||||||||||||||||||||||||||||| Sbjct 543733 TTCTTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGA 543792 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||||||||||||| |||||||||||||||||| | ||||||||| | || Sbjct 543793 TGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATGCAACGAGTTTTT-AC 543851 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||||||| |||||||||||||||| | | | ||||| |||||||||| ||||| Sbjct 543852 CTTGGCCGACAGGTCTGGGTAATCTTTTGAGTGTGCATCGTGATGGGGATAGATTATTGC 543911 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| ||||||||||||||||||||||| |||| |||| |||| ||| ||||| Sbjct 543912 AATTATTAATCTTCAACGAGGAATGCCTAGTAGGCGCAAGTCAGCAGCTTGCGCCGATTA 543971 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||| ||||| Sbjct 543972 AGTCCCTGCCTCTTGTA 543988 >seq389 Length=1148824 Score = 264 bits (292), Expect = 2e-68 Identities = 252/317 (79%), Gaps = 14/317 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG---CTTTGGCGGGTCGCCGG----C 72 || |||||||||| |||||||||||| || | | ||||| ||| | | | Sbjct 947972 GAACGAGACCTTAGCCTGCTAAATAG---GGTCAGTAACTTTGC--GGTTACTGTATCAC 948026 Query 73 TTCTTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| | || || | | | ||||||||||||||||||||||||||||| Sbjct 948027 TTCTTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGA 948086 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||||||||||||| |||||||||||||||||| | ||||||||| | || Sbjct 948087 TGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATGCAACGAGTTTTT-AC 948145 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||||||| |||||||||||||||| | | | ||||| |||||||||| ||||| Sbjct 948146 CTTGGCCGACAGGTCTGGGTAATCTTTTGAGTGTGCATCGTGATGGGGATAGATTATTGC 948205 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| ||||||||||||||||||||||| |||| |||| |||| ||| ||||| Sbjct 948206 AATTATTAATCTTCAACGAGGAATGCCTAGTAGGCGCAAGTCAGCAGCTTGCGCCGATTA 948265 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||| ||||| Sbjct 948266 AGTCCCTGCCTCTTGTA 948282 Score = 264 bits (292), Expect = 2e-68 Identities = 252/317 (79%), Gaps = 14/317 (4%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG---CTTTGGCGGGTCGCCGG----C 72 || |||||||||| |||||||||||| || | | ||||| ||| | | | Sbjct 975553 GAACGAGACCTTAGCCTGCTAAATAG---GGTCAGTAACTTTGC--GGTTACTGTATCAC 975607 Query 73 TTCTTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| | || || | | | ||||||||||||||||||||||||||||| Sbjct 975608 TTCTTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGA 975667 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||||||||||||| |||||||||||||||||| | ||||||||| | || Sbjct 975668 TGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATGCAACGAGTTTTT-AC 975726 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||||||| |||||||||||||||| | | | ||||| |||||||||| ||||| Sbjct 975727 CTTGGCCGACAGGTCTGGGTAATCTTTTGAGTGTGCATCGTGATGGGGATAGATTATTGC 975786 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| ||||||||||||||||||||||| |||| |||| |||| ||| ||||| Sbjct 975787 AATTATTAATCTTCAACGAGGAATGCCTAGTAGGCGCAAGTCAGCAGCTTGCGCCGATTA 975846 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||| ||||| Sbjct 975847 AGTCCCTGCCTCTTGTA 975863 >seq2075 Length=3612 Score = 248 bits (274), Expect = 2e-63 Identities = 250/317 (79%), Gaps = 16/317 (5%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCG---CTTTGGCGGGTCGCCGG----C 72 || |||||||||| |||||||||||| || | | ||||| ||| | | | Sbjct 291 GAACGAGACCTTAGCCTGCTAAATAG---GGTCAGTAACTTTGC--GGTTACTGTATCAC 345 Query 73 TTCTTAGAGGGACTAT-CGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131 |||||||||||||| | || || | | | ||||||||||||||||||||||||||||| Sbjct 346 TTCTTAGAGGGACTTTGCGTGTCTAACGCAAGGAAGTTTGAGGCAATAACAGGTCTGTGA 405 Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191 |||||||||||||||||||| |||||||||||||||||| | ||||||||| | || Sbjct 406 TGCCCTTAGATGTTCTGGGCTGCACGCGCGCTACACTGATGCATGCAACGAGTT-TTTAC 464 Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251 |||||||| |||||||||||||||| | | | ||||| |||||||||| ||||| Sbjct 465 CTTGGCCGACAGGTCTGGGTAATCTTTTGAGTGTGCATCGTGATGGGGATAGATTATTGC 524 Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311 ||||||| ||||| |||| |||||||||||| |||| |||| |||| ||| ||||| Sbjct 525 AATTATTAATCTTC-ACGA-GAATGCCTAGTAGGCGCAAGTCAGCAGCTTGCGCCGATTA 582 Query 312 CGTCCCTGCCCTTTGTA 328 ||||||||| ||||| Sbjct 583 AGTCCCTGCCTCTTGTA 599 >seq912 Length=352595 Score = 122 bits (134), Expect = 2e-25 Identities = 131/172 (76%), Gaps = 1/172 (1%) Strand=Plus/Minus Query 102 TGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCG 161 |||||||||||||||||||||||||||||| | | |||||| ||||||| ||||||||| Sbjct 284363 TGGAAGTTTGAGGCAATAACAGGTCTGTGACGGCTGTAGATGGTCTGGGCTGCACGCGCG 284304 Query 162 CTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTA 221 || || || | ||||||||| | |||||||||| | ||||||||| |||| | | Sbjct 284303 CTTAACCGATGCATGCAACGAGTTTCT-ACCTTGGCCGACAAGTCTGGGTAGTCTTTTGA 284245 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGA 273 | || || |||||| || ||| |||||| | ||||||||||| Sbjct 284244 GCGTGCATCATGACGGGGATTGATTATTTCAATTACTAAATTTCAACGAGGA 284193 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947155813120