Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq4665 82.4 1e-13 seq3816 82.4 1e-13 seq1834 82.4 1e-13 >seq4665 Length=34750 Score = 82.4 bits (90), Expect = 1e-13 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Plus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 |||||||| ||||| |||| || ||||||| |||| ||| | |||||| ||||||||| Sbjct 2651 GAACTGAACCATCTTAGTATCTAAAGGAAAAAAAAT-AACAAAAATTCCCTAAGTAGTGG 2709 Query 231 CGAGCGAAATGGGAT 245 ||||||||||||||| Sbjct 2710 CGAGCGAAATGGGAT 2724 Score = 82.4 bits (90), Expect = 1e-13 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 |||||||| ||||| |||| || ||||||| |||| ||| | |||||| ||||||||| Sbjct 32071 GAACTGAACCATCTTAGTATCTAAAGGAAAAAAAAT-AACAAAAATTCCCTAAGTAGTGG 32013 Query 231 CGAGCGAAATGGGAT 245 ||||||||||||||| Sbjct 32012 CGAGCGAAATGGGAT 31998 >seq3816 Length=5097 Score = 82.4 bits (90), Expect = 1e-13 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 |||||||| ||||| |||| || ||||||| |||| ||| | |||||| ||||||||| Sbjct 2708 GAACTGAACCATCTTAGTATCTAAAGGAAAAAAAAT-AACAAAAATTCCCTAAGTAGTGG 2650 Query 231 CGAGCGAAATGGGAT 245 ||||||||||||||| Sbjct 2649 CGAGCGAAATGGGAT 2635 >seq1834 Length=313589 Score = 82.4 bits (90), Expect = 1e-13 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 |||||||| ||||| |||| || ||||||| |||| ||| | |||||| ||||||||| Sbjct 114155 GAACTGAACCATCTTAGTATCTAAAGGAAAAAAAAT-AACAAAAATTCCCTAAGTAGTGG 114097 Query 231 CGAGCGAAATGGGAT 245 ||||||||||||||| Sbjct 114096 CGAGCGAAATGGGAT 114082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918357156640