Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq3816 140 1e-30 seq1834 140 1e-30 seq4665 132 2e-28 seq4167 100 1e-18 seq2760 100 1e-18 seq2036 100 1e-18 >seq3816 Length=5097 Score = 140 bits (154), Expect = 1e-30 Identities = 95/107 (89%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 372 AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 431 |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 1088 AGACAGCATCCAAGTCGTTACACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 1147 Query 432 CGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 ||||||||| ||| ||||||||||| |||||||||||||| |||| Sbjct 1148 CGCTACCTTTGGACCGTTATAGTTACAGCCGCCGTTTACTGGAGCTT 1194 >seq1834 Length=313589 Score = 140 bits (154), Expect = 1e-30 Identities = 95/107 (89%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 372 AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 431 |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 122087 AGACAGCATCCAAGTCGTTACACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 122146 Query 432 CGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTT 478 ||||||||| ||| ||||||||||| |||||||||||||| |||| Sbjct 122147 CGCTACCTTTGGACCGTTATAGTTACAGCCGCCGTTTACTGGAGCTT 122193 >seq4665 Length=34750 Score = 132 bits (146), Expect = 2e-28 Identities = 95/108 (88%), Gaps = 1/108 (1%) Strand=Plus/Minus Query 372 AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 431 |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 4274 AGACAGCATCCAAGTCGTTACACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 4215 Query 432 CGCTACCTTAGGATGGTTATAGTTAC-CACCGCCGTTTACTGGGGCTT 478 ||||||||| ||| ||||||||||| |||||||||||||| |||| Sbjct 4214 CGCTACCTTTGGACCGTTATAGTTACAGCCCGCCGTTTACTGGAGCTT 4167 Score = 132 bits (146), Expect = 2e-28 Identities = 95/108 (88%), Gaps = 1/108 (1%) Strand=Plus/Plus Query 372 AGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 431 |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 30448 AGACAGCATCCAAGTCGTTACACCTTTCGTGCAGGTCGGAACTTACCCGACAAGGAATTT 30507 Query 432 CGCTACCTTAGGATGGTTATAGTTAC-CACCGCCGTTTACTGGGGCTT 478 ||||||||| ||| ||||||||||| |||||||||||||| |||| Sbjct 30508 CGCTACCTTTGGACCGTTATAGTTACAGCCCGCCGTTTACTGGAGCTT 30555 >seq4167 Length=2538 Score = 100 bits (110), Expect = 1e-18 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Plus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||| ||| ||||||||| |||||| |||||| ||||| ||||||||||||||||| Sbjct 850 GAGACATTAGGAAAGTCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATT 909 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 | |||||||| ||| || | | |||| ||||||||||| Sbjct 910 TTGCTACCTTTGGACCGTCAGA-TTACAGCCGCCGTTTAC 948 >seq2760 Length=14445 Score = 100 bits (110), Expect = 1e-18 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||| ||| ||||||||| |||||| |||||| ||||| ||||||||||||||||| Sbjct 1740 GAGACATTAGGAAAGTCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATT 1681 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 | |||||||| ||| || | | |||| ||||||||||| Sbjct 1680 TTGCTACCTTTGGACCGTCAGA-TTACAGCCGCCGTTTAC 1642 Score = 100 bits (110), Expect = 1e-18 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||| ||| ||||||||| |||||| |||||| ||||| ||||||||||||||||| Sbjct 7952 GAGACATTAGGAAAGTCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATT 7893 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 | |||||||| ||| || | | |||| ||||||||||| Sbjct 7892 TTGCTACCTTTGGACCGTCAGA-TTACAGCCGCCGTTTAC 7854 Score = 100 bits (110), Expect = 1e-18 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||| ||| ||||||||| |||||| |||||| ||||| ||||||||||||||||| Sbjct 14163 GAGACATTAGGAAAGTCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATT 14104 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 | |||||||| ||| || | | |||| ||||||||||| Sbjct 14103 TTGCTACCTTTGGACCGTCAGA-TTACAGCCGCCGTTTAC 14065 >seq2036 Length=3771 Score = 100 bits (110), Expect = 1e-18 Identities = 83/100 (83%), Gaps = 1/100 (1%) Strand=Plus/Minus Query 371 GAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 430 |||||| ||| ||||||||| |||||| |||||| ||||| ||||||||||||||||| Sbjct 3471 GAGACATTAGGAAAGTCGTTACACCATTCATGCAGGACGGAATTTACCCGACAAGGAATT 3412 Query 431 TCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTAC 470 | |||||||| ||| || | | |||| ||||||||||| Sbjct 3411 TTGCTACCTTTGGACCGTCAGA-TTACAGCCGCCGTTTAC 3373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702320583040