Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq4665 73.4 8e-11 seq3816 73.4 8e-11 seq1834 73.4 8e-11 >seq4665 Length=34750 Score = 73.4 bits (80), Expect = 8e-11 Identities = 108/151 (72%), Gaps = 3/151 (2%) Strand=Plus/Plus Query 80 TAAAAGAAGTTTACAATCCGTAGA--ACCT-TCATCCTTCACGCTACTTGGCTGGTTCAG 136 |||||||||||||||| | | | || || ||||||||| || ||| ||| Sbjct 1331 TAAAAGAAGTTTACAACTAAAAAATAAGCTGTCTTCCTTCACGTGACGACGCTCTGTCAA 1390 Query 137 ACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTC 196 || || ||||| || ||||| |||||| ||||||||||||||||||| | || | Sbjct 1391 GCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTGTATT 1450 Query 197 TCAGTTCCAATGTGGGGGACCTTCCTCTCAG 227 ||| | ||||||||| | | |||||||| Sbjct 1451 TCAATCCCAATGTGGCTGGTCCCCCTCTCAG 1481 Score = 73.4 bits (80), Expect = 8e-11 Identities = 108/151 (72%), Gaps = 3/151 (2%) Strand=Plus/Minus Query 80 TAAAAGAAGTTTACAATCCGTAGA--ACCT-TCATCCTTCACGCTACTTGGCTGGTTCAG 136 |||||||||||||||| | | | || || ||||||||| || ||| ||| Sbjct 33391 TAAAAGAAGTTTACAACTAAAAAATAAGCTGTCTTCCTTCACGTGACGACGCTCTGTCAA 33332 Query 137 ACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTC 196 || || ||||| || ||||| |||||| ||||||||||||||||||| | || | Sbjct 33331 GCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTGTATT 33272 Query 197 TCAGTTCCAATGTGGGGGACCTTCCTCTCAG 227 ||| | ||||||||| | | |||||||| Sbjct 33271 TCAATCCCAATGTGGCTGGTCCCCCTCTCAG 33241 >seq3816 Length=5097 Score = 73.4 bits (80), Expect = 8e-11 Identities = 108/151 (72%), Gaps = 3/151 (2%) Strand=Plus/Minus Query 80 TAAAAGAAGTTTACAATCCGTAGA--ACCT-TCATCCTTCACGCTACTTGGCTGGTTCAG 136 |||||||||||||||| | | | || || ||||||||| || ||| ||| Sbjct 4028 TAAAAGAAGTTTACAACTAAAAAATAAGCTGTCTTCCTTCACGTGACGACGCTCTGTCAA 3969 Query 137 ACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTC 196 || || ||||| || ||||| |||||| ||||||||||||||||||| | || | Sbjct 3968 GCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTGTATT 3909 Query 197 TCAGTTCCAATGTGGGGGACCTTCCTCTCAG 227 ||| | ||||||||| | | |||||||| Sbjct 3908 TCAATCCCAATGTGGCTGGTCCCCCTCTCAG 3878 >seq1834 Length=313589 Score = 73.4 bits (80), Expect = 8e-11 Identities = 108/151 (72%), Gaps = 3/151 (2%) Strand=Plus/Minus Query 80 TAAAAGAAGTTTACAATCCGTAGA--ACCT-TCATCCTTCACGCTACTTGGCTGGTTCAG 136 |||||||||||||||| | | | || || ||||||||| || ||| ||| Sbjct 115475 TAAAAGAAGTTTACAACTAAAAAATAAGCTGTCTTCCTTCACGTGACGACGCTCTGTCAA 115416 Query 137 ACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTC 196 || || ||||| || ||||| |||||| ||||||||||||||||||| | || | Sbjct 115415 GCTTGCGCTCATTGCAGAAGATTCCCCACTGCAGCCTCCCGTAGGAGTTTGGGCTGTATT 115356 Query 197 TCAGTTCCAATGTGGGGGACCTTCCTCTCAG 227 ||| | ||||||||| | | |||||||| Sbjct 115355 TCAATCCCAATGTGGCTGGTCCCCCTCTCAG 115325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068750140480