Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3497 381 9e-104 seq31349 208 1e-51 >seq3497 Length=5709 Score = 381 bits (422), Expect = 9e-104 Identities = 242/257 (94%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct 3209 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 3152 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 3151 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCCCAAGATT 3092 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||| Sbjct 3091 ACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 3032 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 3031 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTCGCCTAAAC 2972 Query 240 GGCCAT-CTCCCTCGAA 255 ||| || |||||| || Sbjct 2971 GGCGATAGTCCCTCTAA 2955 >seq31349 Length=8237 Score = 208 bits (230), Expect = 1e-51 Identities = 187/231 (81%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| || || | ||||||| || ||||||||||||| | Sbjct 4328 GTACAAAGGGCAGGGACATAATCAATGCAAGAT-GATGACTTGCACTTACTAGGAATT-C 4271 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||| |||| | | |||||||| |||||||||||||||||||| | ||| | |||| Sbjct 4270 CTCGTTCAAGATCTATAATTGCAAAGATCTATCCCCATCACGATGCATATTCGA-GATTG 4212 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 || | |||| | ||| ||| |||| || |||||||||||| ||||||| | Sbjct 4211 CCATACCATGTCTGGTTAGGC-----ACTTGTTGTATGCATCAGTGTAGCACGCGTGCAG 4157 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||| |||| |||||||||||| |||||||||||||||||||||||| || Sbjct 4156 CCCAGGACATATAAGGGCATCACTGACCTGTTATTGCCTCAAACTTCCATG 4106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751726557525