Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq3497 242 7e-62 seq31349 178 2e-42 >seq3497 Length=5709 Score = 242 bits (268), Expect = 7e-62 Identities = 203/245 (83%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 2318 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 2377 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 2378 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 2436 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 2437 TAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 2496 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 2497 AGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 2555 Query 314 AGGGG 318 |||| Sbjct 2556 GGGGG 2560 >seq31349 Length=8237 Score = 178 bits (196), Expect = 2e-42 Identities = 191/249 (77%), Gaps = 14/249 (6%) Strand=Plus/Plus Query 70 GACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCA 129 |||| ||||| ||| |||||||||||||| |||||||| || || ||||||||||||| Sbjct 3462 GACTGTTACTGTGAGAAAATTAGAGTGTTTCAAGCAGGCTTTCGCAAGAATACATTAGCA 3521 Query 130 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGA 189 |||||||| |||| | | | || | ||| ||||| | | || Sbjct 3522 TGGAATAAC-GAAT--GTATTTAGAATCG---TGGTTTAATTCTAAA-------TTACGA 3568 Query 190 TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTA 249 ||||||| || ||| ||||| | |||||| |||||||||||||||||||||||||||| Sbjct 3569 TTAATAGAGACAGTTGGGGGCATTAGTATTTAATTGTCAGAGGTGAAATTCTTGGATTTG 3628 Query 250 TTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 || ||||||||| ||||||||| || |||||||||||||||||||||| | ||||| Sbjct 3629 TTAAAGACTAACGTATGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGGACGAA 3687 Query 310 AGTTAGGGG 318 || |||||| Sbjct 3688 AGATAGGGG 3696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914856479680