Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq13080 187 5e-45 >seq13080 Length=4844 Score = 187 bits (206), Expect = 5e-45 Identities = 215/282 (76%), Gaps = 8/282 (3%) Strand=Plus/Plus Query 66 TGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCG 125 ||||||||||||||||||||||||||||| ||| |||||||| ||||||| |||| Sbjct 2 TGGGCCGTGTCTCAGTCCCAATGTGGCCGGTCACCCTCTCAGGTCGGCTACGGATCACAA 61 Query 126 GCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGAT 185 |||||| ||| |||| | ||||||||| ||||| | |||| ||||||| | | |||| Sbjct 62 CCTTGGTAGGCCATTACCCCACCAACTAGTTAATCCGACGCGGGCCCATCCTGTACCGAT 121 Query 186 AAATCTTT--GGTCAAAG-AATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTCGT 242 |||||||| | | ||| ||| | | || | | || ||||||| |||| | |||| Sbjct 122 AAATCTTTCCGCCCTAAGCCATG-CGGCTTCGTGCG-CA-TATGCGGCATTAACAGTCGT 178 Query 243 TTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCA 302 |||||| |||||||| | | | |||||||| | |||||||||||||||| |||||| Sbjct 179 TTCCAACTGTTATTCCCCAGTACAGGGCAGGTTACCCACGTGTTACTCACCCATCCGCCG 238 Query 303 CTAAGCTATATATCCAGCAAGCTTTCAACATAGCTCCGTTCG 344 ||||| || ||| || || |||||| || ||||| ||| Sbjct 239 CTAAGATAAGAATC--GCTAGGCTTCAACTTATCTCCGCTCG 278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998025250560