Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq3497 134 1e-29 >seq3497 Length=5709 Score = 134 bits (148), Expect = 1e-29 Identities = 139/178 (78%), Gaps = 3/178 (2%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC-GAATACATTACCATGGA 72 |||||||||| ||||||||| | |||||||| ||| | |||| | |||||||| ||||| Sbjct 2318 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 2377 Query 73 ATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAA 132 |||| | |||||| | |||| ||||| ||| || | ||| || |||||||| | Sbjct 2378 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGA-GTAATGATTA 2435 Query 133 ATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 ||| ||| ||||||||| | ||||| || |||| ||||||||||||||||||||| Sbjct 2436 ATAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTAT 2493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511813826400