Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq7910 122 5e-26 >seq7910 Length=324 Score = 122 bits (134), Expect = 5e-26 Identities = 99/118 (84%), Gaps = 4/118 (3%) Strand=Plus/Minus Query 1 GAACCCAAA-GACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||||| |||||||||||||||||||||||||| || | |||| || | | Sbjct 227 GAACCCAAAAGACTTTGATTTCTCGTAAGGTGCCGA---AGGCGGAATGTGCACGCCCTC 171 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| ||||||||||| ||||||||||||||||||| || Sbjct 170 CGATCCCTAGTCGGCAACGTTTATGGTTAAGACTAGGACGGTATCTGATCGTCTTTGA 113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278115113280