Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq103035 154 3e-35 seq7910 113 8e-23 >seq103035 Length=413 Score = 154 bits (170), Expect = 3e-35 Identities = 116/135 (86%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 69 GGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAG 127 |||| ||||| |||| ||||||||||||||||||||||| ||| ||| ||||||||||| Sbjct 279 GGACGCTTACTGTGAAGAAATTAGAGTGTTCAAAGCAGGCATTTAGCTTGAATACATTAG 338 Query 128 CATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAAT 187 ||||||||||| ||||||||| | | | ||||||||||||| |||||||| ||||| Sbjct 339 CATGGAATAATGGAATAGGACTTTGGTTCCTATTTTGTTGGTGCGTAGGACCGAAGTAAT 398 Query 188 GATTAATAGGGATAG 202 |||||||||||| || Sbjct 399 GATTAATAGGGACAG 413 >seq7910 Length=324 Score = 113 bits (124), Expect = 8e-23 Identities = 91/110 (83%), Gaps = 5/110 (5%) Strand=Plus/Plus Query 214 AGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGC 273 |||||| |||| |||||||||||||||| || |||| |||||||||| ||||||||| Sbjct 2 AGTATTTAATTTCCAGAGGTGAAATTCTTTGAAATATTAAAGACTAACTTATGCGAAAGC 61 Query 274 GTTCA-----CCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 || | |||| |||||||||||||||| ||||||||||||||||| Sbjct 62 ATTTATTTTGCCAATAATGTTTTCATTAATCATTGAACGAAAGTTAGGGG 111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914201040896