Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq86356 259 8e-67 >seq86356 Length=715 Score = 259 bits (286), Expect = 8e-67 Identities = 221/266 (83%), Gaps = 15/266 (6%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 438 TCAGTGTAGCACGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTGCCTC 497 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG----CCAGCCACC-AACCAT 130 || ||||| | | | | | ||| |||||||||||||| | || | | || | Sbjct 498 AA-CTTCCTTGTGGTTGCACACAAC-GTCCCTCTAAGAAGTTATCAAGTCTCATAAGAAA 555 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTT-ATCGGAATTAACCAGACAA 189 || | | | |||||||||||| | |||||||||||||| | ||||||||||||||||| Sbjct 556 AGAC-AGGTAACTATTTAGCAGGCTGAGGTCTCGTTCGTTTAACGGAATTAACCAGACAA 614 Query 190 ATCACTCCACCAACTAAGAACGGCCATGCACCACC------ACCCATAGAATCAAGAAAG 243 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 615 ATCACTCCACCAACTAAGAACGGCCATGCACCACCAAAAATACCCATAGAATCAAGAAAG 674 Query 244 AGCTATCAATCTGTCCTCCCTCGATA 269 ||||||||||||||| ||||| || Sbjct 675 AGCTATCAATCTGTCAATCCTCGCTA 700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795957455712