Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4910 145 1e-32 seq90927 134 2e-29 >seq4910 Length=338 Score = 145 bits (160), Expect = 1e-32 Identities = 100/112 (89%), Gaps = 1/112 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGT-CATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| | | |||||||||||| | | || | | |||||||||||||||||||||||||| Sbjct 217 TACTGACCTGAATTACCATTGCGACAGCGTTTCGTCAGTAGGGTAAAACTAACCTGTCTC 276 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAAC 111 | |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 277 ACGACGGTCTAAACCCAGCTCACGTTCCCTGTTAGTGGGTGAACAATCCAAC 328 >seq90927 Length=593 Score = 134 bits (148), Expect = 2e-29 Identities = 100/116 (86%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 ||||||| | ||||| |||| || | | ||||||||||||||||||||||||||| Sbjct 472 TACTAAGTTGGATTACTGTTGGAGCATCAAATAATCAGTAGGGTAAAACTAACCTGTCTC 531 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTT 115 | ||||||||||||||||||||||||||||||||| ||||||||||||| || ||| Sbjct 532 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCGGGTGAACAATCCGACACTT 587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 853467405312