Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq86800 73.4 4e-11 >seq86800 Length=704 Score = 73.4 bits (80), Expect = 4e-11 Identities = 102/147 (69%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 |||||||| |||||| | |||| ||||| |||||| ||| | | |||| ||| Sbjct 428 GGGTCTTTCCGTCCCGTTAGAATTAATAGGCATTTTCACCTATAATTCGGTTTCGTCGAG 487 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 || | ||||||| |||||||||| |||||| || | ||| || Sbjct 488 CTATATTTGGAGACAGTAGGGCAGTCGTTACACCATTCATGCAGGACGACAATTAATCGC 547 Query 145 CAAGGAATTTCGCTACCTTAGGACCGT 171 ||| ||||||||||||||||||||||| Sbjct 548 CAATGAATTTCGCTACCTTAGGACCGT 574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546621385248