Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= AAMG01001416.1 Length=341 Score E Sequences producing significant alignments: (Bits) Value seq13090 95.1 2e-17 >seq13090 Length=302 Score = 95.1 bits (104), Expect = 2e-17 Identities = 127/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 37 GTTGGCACTGGCCACGCCGTAGATGGTGGCGACAAACGCCACGGCAATGCCGCTGCCCAG 96 ||||||| | || ||||| |||||||| ||||| ||||||||||| || ||||| Sbjct 23 GTTGGCAAGACCAACACCGTAAATGGTGGCCACAAAAGCCACGGCAATCCCCGGCCCCAG 82 Query 97 TTGCGAAGGGTCGGCGAGGTTGCCCATCACGTGGATCAGGCCCATCACCGCACCGATGAT 156 | | ||| || || || || ||||||||| || ||||| | || || ||||| || Sbjct 83 TGCTGCAGGATCTGCCAGATTATTCATCACGTGAATGAGGCCAAGAACAGCTCCGATAAT 142 Query 157 GCCGATGGTCGGCGCGTAGCCGCCCATGCTTTCAAAGACTTTGGCGGCGTTGATATC 213 || || || |||| || || ||||| |||| | || |||||||| || || || Sbjct 143 ACCAATAGTTGGCGAATAACCACCCATAGCTTCATACACCTTGGCGGCATTCATTTC 199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 987720705024