Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq102405 93.3 3e-17 >seq102405 Length=420 Score = 93.3 bits (102), Expect = 3e-17 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60 GCTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTA 119 ||||||||| |||||| | ||| ||||||| ||||||| ||| ||||||||||||| Sbjct 420 GCTTTCGCACCTGCTCGACCTGTCCGTCTCGCAGTCAAGCAACCTTATGCCATTGCACTA 361 Query 120 TCACTACGATTTCCGACCGTA 140 ||| ||||||||||||||||| Sbjct 360 TCAGTACGATTTCCGACCGTA 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351639798400