Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= AAMG01002002.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq91871 84.2 2e-14 >seq91871 Length=571 Score = 84.2 bits (92), Expect = 2e-14 Identities = 119/166 (72%), Gaps = 1/166 (1%) Strand=Plus/Plus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60 |||||||||| | || | || | |||||||||||| | | | || || | ||| Sbjct 341 TGCTGACCAATGTTGCGGGGCTACTCGACAAGGAAGGCGAAATACTCACAGGGCT-GACA 399 Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAG 120 || | || || || || ||||| ||||||||||| ||| | |||||||||||||| ||| Sbjct 400 ACTGAGCAGGTTGATGAGCTGATTGCCGACGGCACGATCAATGGCGGCATGCTGCCAAAG 459 Query 121 ATCCGTTGCGCACTGGAAGCAGTGCAAGGCGGCGTGGGCAGCTCGC 166 || ||||||| || || || || || ||||| |||| ||| Sbjct 460 ATTGGTTGCGCGCTCGATGCGGTAAAATCGGGCGTCACCAGCGCGC 505 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533834920096