Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq50933 86.0 1e-14 seq21297 86.0 1e-14 >seq50933 Length=212 Score = 86.0 bits (94), Expect = 1e-14 Identities = 102/137 (74%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 80 ATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCT 139 ||||| | | | || || ||||| || || | ||| |||| || | |||||| | | Sbjct 70 ATCCACCTTCAATACGGCGAGGAAAGCAGATTGGGGGA-TTTCGACTTGCCCCACTTGTT 128 Query 140 TCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCAC 199 |||| || || ||||| || ||||| || || | ||||| ||||||||||| || || | Sbjct 129 TCATCCGCTTCTTACCCGCTTTTTGTTTTTCCAAGAGCTTACGCTTACGGCTAACATCGC 188 Query 200 CGCCGTAGCATTTGGCC 216 ||||||||||||| ||| Sbjct 189 CGCCGTAGCATTTAGCC 205 >seq21297 Length=274 Score = 86.0 bits (94), Expect = 1e-14 Identities = 72/87 (83%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 102 AAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTACCGGCCTT 161 |||||||||| | ||||| || || ||||||||| | ||||||||||||||||| || || Sbjct 93 AAGGCTTCTT-GCGGAATCTCTACATTGCCCACTTGTTTCATGCGTTTTTTACCCGCTTT 35 Query 162 TTGCTTCTCAAGCAGCTTGCGCTTACG 188 ||||||||| | || || || ||||| Sbjct 34 TTGCTTCTCTAACAATTTACGTTTACG 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 840710083744