Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq101186 80.6 5e-13 >seq101186 Length=432 Score = 80.6 bits (88), Expect = 5e-13 Identities = 89/119 (75%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 182 CCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAGTAGGCCCAGGCGTCGCCA 241 ||||| ||||||| ||| | ||| | || |||||| | ||| || ||||| Sbjct 258 CCCCAGCGGTAGGTTCGGAGGGATGCTTCTTCGAAAGGGAAGGATTTCCACGCATCGCCG 199 Query 242 TCGGCGCTGTAGTCTTCGCGCACCGTGCCCCATTGGCGTTCGCTCAGGTAGGGGCCCCA 300 || ||| ||||||||||| ||||||||||||||||||||| ||||||| |||||| Sbjct 198 TCTGCGGAATAGTCTTCGCGTACCGTGCCCCATTGGCGTTCGGAGAGGTAGGTGCCCCA 140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1006899747840