Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq76209 250 5e-64 seq94389 224 2e-56 seq78207 223 6e-56 seq72356 174 3e-41 seq103394 152 9e-35 seq96356 140 6e-31 seq77926 131 3e-28 seq69987 122 2e-25 seq9294 107 4e-21 seq6703 100 5e-19 seq16164 98.7 2e-18 seq29841 96.9 6e-18 seq24439 95.1 2e-17 seq85905 89.7 9e-16 seq29417 80.6 5e-13 seq39530 75.2 2e-11 >seq76209 Length=1242 Score = 250 bits (276), Expect = 5e-64 Identities = 258/330 (78%), Gaps = 22/330 (7%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| | ||||||||||||||| | | |||||||||||||||| ||| | ||||||| Sbjct 864 AGTGCATACGGTGGATGCCTTGGCAGTCAGAGGCGATGAAGGACGTTGTAACATGCGATA 923 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 ||| ||||||||| | |||| |||||||||||| ||||||||||||||||||||| Sbjct 924 AGCCTCGGGGAGTGTGTAAACTCACTTTGATCCGAGGATTTCCGAATGGGGAAACCC--A 981 Query 121 CCT------TTGGG--TCATTGCATGCTGAATACATAGGT--ATGCAAAGCGAACGCGGC 170 ||| || || ||||| |||||||||||||| ||| | ||||||| || Sbjct 982 CCTAATTTATTAGGTATCATT---AACTGAATACATAGGTTAATG--AGGCGAACGAGGG 1036 Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 ||||||||||||||||||| | |||||||||||||||||||||||||| ||||| || Sbjct 1037 GAACTGAAACATCTAAGTACCCTTAGGAAAAGAAATCAACCGAGATTCCCTTAGTAGCGG 1096 Query 231 CGAGCGAAATGGGATGAG-CCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAA 289 ||||||||| |||| || || ||| || |||| |||||| |||| ||||||| Sbjct 1097 CGAGCGAAAGGGGACCAGCCCAAAACGGCAT-GTTG---TGATAGACGAATGATCTGGAA 1152 Query 290 ATAGGAGCCATAGCGGGTGATAGCCCCGTA 319 | ||| | | |||||||||||||||| Sbjct 1153 AGTTCAGCGAAACAGGGTGATAGCCCCGTA 1182 >seq94389 Length=523 Score = 224 bits (248), Expect = 2e-56 Identities = 228/291 (78%), Gaps = 16/291 (5%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGG 69 ||||||||||||||| | | |||||||||||||||| ||||| ||||| ||||| |||| Sbjct 292 GGTGGATGCCTTGGCAGTCAGAGGCGATGAAGGACGT-GTAGCCTGCGAAAAGCTTCGGG 234 Query 70 GAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTT----- 124 |||| ||||||| ||||||||||| |||| ||||||||||||||||| || | Sbjct 233 GAGTCGGCAAACAGACTTTGATCCGGAGATGTCCGAATGGGGAAACCCACCCAATGTAAG 174 Query 125 -TGGGTCAT--TGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACA 181 ||||| || |||| |||||| ||||||| | | ||||||| || ||||||||||| Sbjct 173 TTGGGT-ATCCTGCA--CTGAATTCATAGGTGTAGGAGGCGAACGAGGGGAACTGAAACA 117 Query 182 TCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATG 241 |||||||| | ||||||||||||||| ||||||||| ||||| ||||||||| | Sbjct 116 TCTAAGTACCCTTAGGAAAAGAAATCAATTGAGATTCCCCCAGTAGCGGCGAGCGACCGG 57 Query 242 GGATGAGCCTTTACGAGATAGTTGAATTGA--TAGTGGAATCCTCTGGAAA 290 ||| ||||| | | ||||| | |||| |||||||| |||||||| Sbjct 56 GGAGTAGCCTGCAAGTGATAG--CAGTTGAGTTAGTGGAACGGTCTGGAAA 8 >seq78207 Length=1114 Score = 223 bits (246), Expect = 6e-56 Identities = 247/326 (76%), Gaps = 14/326 (4%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| ||||||||||||||||||||||||||||||||||||||| || ||||| | Sbjct 387 AGTGCATATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTGATAATCTGCGAAA 328 Query 61 AGCTGCGGGGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 |||| ||||||| ||| ||| | |||||||||| |||| ||||||||||||||||| Sbjct 327 AGCTTCGGGGAGCTGAT-AAATAAGCTTTGATCCGGAGATGTCCGAATGGGGAAACCCAC 269 Query 120 CCCTTTGGGTCATTGCATGCTGAATACATAGGTA------TGCAAAGCGAACGCGGCGAA 173 || |||| | || | ||||||| ||||| | ||||| ||| | ||| Sbjct 268 CCGCAAGGGTAACCGC-TCCTGAATATATAGGGAGATGGTGGCAAACCGA-----GTGAA 215 Query 174 CTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGA 233 ||||||||||||||||||| ||||||| ||||||||||||||||| |||||||||||| Sbjct 214 CTGAAACATCTAAGTAGCTCGAGGAAAATAAATCAACCGAGATTCCGTAAGTAGTGGCGA 155 Query 234 GCGAAATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAG 293 ||||| ||| ||||| | ||| | |||||| ||| |||||| Sbjct 154 GCGAACGCGGAACAGCCTGTTATTTTTAGCACATGCGATAGTAGAACGGAATGGAAAGTC 95 Query 294 GAGCCATAGCGGGTGATAGCCCCGTA 319 ||||||| ||||||||||||| || Sbjct 94 CGGCCATAGAGGGTGATAGCCCCTTA 69 >seq72356 Length=1541 Score = 174 bits (192), Expect = 3e-41 Identities = 185/241 (77%), Gaps = 6/241 (2%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| ||||| ||||||||||| | | |||||||||||||||| || ||||||| Sbjct 790 AGGGCATTTGGTGAATGCCTTGGCGTTGAGAGGCGATGAAGGACGTGATACGCTGCGATA 731 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 || | |||||| || || | ||||||||| | |||||||||||||||||||| Sbjct 730 AGGCGTGGGGAGCT-GCGAATAAGCTTTGATCCACGCATTTCCGAATGGGGAAACCCACA 672 Query 121 CCTTTGGGTCA---TTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGA 177 ||| || | ||||| |||||||||||||| | | |||||| ||| ||||||| Sbjct 671 GCTTCGGCTGTATCTTGCA--CTGAATACATAGGTGTAAGAGGCGAACCCGGGGAACTGA 614 Query 178 AACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGA 237 |||||||||||| | | |||||| || ||||||||||| || ||||| ||||||||| Sbjct 613 AACATCTAAGTACCCGGAGGAAAGGACATCAACCGAGACTCTGCTAGTAGCGGCGAGCGA 554 Query 238 A 238 | Sbjct 553 A 553 >seq103394 Length=411 Score = 152 bits (168), Expect = 9e-35 Identities = 232/322 (72%), Gaps = 20/322 (6%) Strand=Plus/Minus Query 9 TGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG 68 |||||||||||||||| ||| |||||||||||||||| || |||||||||| || Sbjct 373 TGGTGGATGCCTTGGCAGTTAGAGGCGATGAAGGACGTGTTAATCTGCGATAAGCGTTGG 314 Query 69 GGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 || ||| ||| || | | || ||||||||||||||||||||| ||| | Sbjct 313 TAAGGTGATAAAA-ACCGTAATAGCCAACGATTTCCGAATGGGGAAACCCA---CTTAGC 258 Query 128 GTCA------TTGCATG--CTGAATACATAGGT--ATGCAAAGCGAACGCGGCGAACTGA 177 | | | ||| |||||||||||||| ||| | || ||| || ||||||| Sbjct 257 ATAAGCTAGGTATCATTAACTGAATACATAGGTTAATG--AGGCAAACCGGGAGAACTGA 200 Query 178 AACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGA 237 |||||||||||| | ||||||||||||||||||||||| | ||||| ||||||||| Sbjct 199 AACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTTCGTTAGTAGCGGCGAGCGA 140 Query 238 AATGGGATGAGCCTTTACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGC 297 | | || |||| ||| || | ||| | ||||||||| |||||||| | | Sbjct 139 ACGCGAATCAGCCCTTA--AGCTTATTG-GGCGCTAGTGGAATGTTCTGGAAAGGACAAC 83 Query 298 CATAGCGGGTGATAGCCCCGTA 319 ||| ||||||||| |||||| Sbjct 82 GATACAGGGTGATAGTCCCGTA 61 >seq96356 Length=490 Score = 140 bits (154), Expect = 6e-31 Identities = 178/241 (74%), Gaps = 13/241 (5%) Strand=Plus/Minus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 |||| | |||||| ||| | | ||||||||||||||| || ||||| |||||||| Sbjct 236 ATGGGGAATGCCTAGGCTCTCAGAGGCGATGAAGGACGCGATAAGCTGCGAAAAGCTGCG 177 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||| | ||| | || | |||||||||||| ||||||||||| ||||| || |||| Sbjct 176 GGGATCG-GCACATACGATATGATCCGCAGATATCCGAATGGGGCAACCCAGCA-TTTG- 120 Query 128 GTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAG 187 | |||| | || | | | | ||||| | ||| ||||||||||||||||| Sbjct 119 ---AAGACATGTT--ATCCGCAAGGAGGCAAACC-----CGGGGAACTGAAACATCTAAG 70 Query 188 TAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGA 247 || | | ||||| ||||| ||| | |||||| | ||||| |||||||||||| |||| | Sbjct 69 TACCCGGAGGAAGAGAAAACAAAAGTGATTCCGATAGTAGCGGCGAGCGAAATCGGATTA 10 Query 248 G 248 | Sbjct 9 G 9 >seq77926 Length=1131 Score = 131 bits (144), Expect = 3e-28 Identities = 181/250 (72%), Gaps = 10/250 (4%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||||| || | |||||| ||| | | |||||| ||| ||||| || ||||||| Sbjct 74 AGGGCACACGGGGAATGCCTAGGCTCTCAGAGGCGAAGAAAGACGTGATAAGCTGCGATA 133 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC 120 |||| || |||| | ||||| || ||||| || ||||||| |||||||||||||||| Sbjct 134 AGCTACGAGGAG-GGGCAAATACCTATTGATTCGTAGATTTCTGAATGGGGAAACCCGG- 191 Query 121 CCTTTGGGTCATTGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAAC 180 | | | | ||| | | || | ||| | || |||||| |||||||||| Sbjct 192 ---TATGTTGAAGACATAC-CACCACTTCGGTGGG----GCAAACGCGCTGAACTGAAAC 243 Query 181 ATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAAT 240 |||||||||| |||||| |||||| ||| | |||| || ||||| |||||||||| | Sbjct 244 ATCTAAGTAGGCGCAGGAGAAGAAAACAAGAGTGATTTCCGTAGTAGCGGCGAGCGAAGT 303 Query 241 GGGATGAGCC 250 || | |||| Sbjct 304 GGAAACAGCC 313 >seq69987 Length=1764 Score = 122 bits (134), Expect = 2e-25 Identities = 138/182 (76%), Gaps = 5/182 (3%) Strand=Plus/Plus Query 139 CTGAATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGA 198 ||||||||||||| | ||| |||||||| ||||||||||||||||||| | | |||| Sbjct 1081 CTGAATACATAGGGTTAAGAAGGGAACGCGGGGAACTGAAACATCTAAGTACCCGTAGGA 1140 Query 199 AAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGA-GCCTTTACGA 257 || || ||||||||||| ||| ||||| |||||||||| ||| | ||| | | Sbjct 1141 AAGGACATCAACCGAGACTCCGTCAGTAGCGGCGAGCGAACGCGGACCAGGCCAGT--GG 1198 Query 258 GATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCCG 317 | |||| | || ||||||| |||||||| ||||||| |||||||||||||| Sbjct 1199 CAAAGTTAAGTT--AAGTGGAACATTCTGGAAAGTTTGGCCATAGTGGGTGATAGCCCCG 1256 Query 318 TA 319 || Sbjct 1257 TA 1258 Score = 86.0 bits (94), Expect = 1e-14 Identities = 84/107 (79%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGG 70 |||||||||||||| |||| ||||||||||||| || ||||| ||||| |||| Sbjct 872 GTGGATGCCTTGGCATGCACAGCCGATGAAGGACGTGATACGCTGCGAAAAGCTATGGGG 931 Query 71 AGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 || || || || || |||||| |||| ||||||||||||||||| Sbjct 932 AG-CTGCGAATACGCTATGATCCATAGATGTCCGAATGGGGAAACCC 977 >seq9294 Length=316 Score = 107 bits (118), Expect = 4e-21 Identities = 134/182 (74%), Gaps = 9/182 (5%) Strand=Plus/Plus Query 139 CTGAATACATAGGTATGCAA-AGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGG 197 ||||||||||||| | || ||| ||| ||| ||||||||||||||||||| | | ||| Sbjct 1 CTGAATACATAGGACTTAAAGAGCAAACCCGGGGAACTGAAACATCTAAGTACCCGGAGG 60 Query 198 AAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGAGCCTTTACGA 257 ||| |||||||| || | |||| ||||| |||||||||| ||||| |||| Sbjct 61 AAAGGAAATCAATAGATACTCCCCTAGTAGCGGCGAGCGAACGGGGATCAGCC------- 113 Query 258 GATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGCCCCG 317 || | || |||| | | ||| ||||||| ||||||| |||||| ||||||| Sbjct 114 GAGCGATG-ATTGTGACTAGAACGGCCTGGAAAGGTCGGCCATAGTGGGTGACAGCCCCG 172 Query 318 TA 319 || Sbjct 173 TA 174 >seq6703 Length=329 Score = 100 bits (110), Expect = 5e-19 Identities = 94/119 (79%), Gaps = 2/119 (2%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| | ||||||||||||||| ||| |||||||||||||||| | ||| ||||| | Sbjct 144 AGCGCATACGGTGGATGCCTTGGCAGTTAGAGGCGATGAAGGACGTTGGAGCCTGCGAAA 85 Query 61 AGCTGCGGGGAGTGAGCAAACACAC--TTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 |||| || ||| | |||| ||| | | | | || |||| ||||||||||||||||| Sbjct 84 AGCTTTGGTGAGGGGGCAACCACCCGTTATTAACCAAAGATGTCCGAATGGGGAAACCC 26 >seq16164 Length=287 Score = 98.7 bits (108), Expect = 2e-18 Identities = 92/116 (79%), Gaps = 1/116 (1%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 || ||| ||||||||||||||||| | | |||||||||||||||| ||| ||||||| Sbjct 154 AGAGCATCTGGTGGATGCCTTGGCGCTAAGAGGCGATGAAGGACGTGGTACGCTGCGATA 213 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACC 116 || |||||| || |||| |||||||||| |||||||||||||||| || Sbjct 214 AGTCATGGGGAG-CTGCGAACAAGCTTTGATCCGTGAATTTCCGAATGGGGAACCC 268 >seq29841 Length=252 Score = 96.9 bits (106), Expect = 6e-18 Identities = 88/110 (80%), Gaps = 7/110 (6%) Strand=Plus/Minus Query 11 GTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGG 70 |||||||||||||| ||||||||||||||||||| | | |||||||||| ||| | Sbjct 231 GTGGATGCCTTGGCATGTACAGGCGATGAAGGACGTGGCACGCTGCGATAAGCGTCGGTG 172 Query 71 A---GTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 | |||||||| || |||| ||| ||||||||||||||||||||| Sbjct 171 AGCTGTGAGCAAGCA----TTGACCCGACGATTTCCGAATGGGGAAACCC 126 >seq24439 Length=266 Score = 95.1 bits (104), Expect = 2e-17 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||| ||| |||||||||||| | | |||||||||||||||| || ||||||| Sbjct 170 AGTGCAAGTGGCGGATGCCTTGGCATTCAGAGGCGATGAAGGACGTGTTAATCTGCGATA 111 Query 61 AGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 |||| ||| || | ||| || ||||||| |||||||||||||||| ||||| Sbjct 110 AGCTTCGGTTAGGTGGTAAATGACCTATGATCCGGAGATTTCCGAATGGGGGAACCC 54 >seq85905 Length=734 Score = 89.7 bits (98), Expect = 9e-16 Identities = 87/110 (79%), Gaps = 3/110 (3%) Strand=Plus/Plus Query 9 TGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGG 68 |||||||||||||||| | | |||||||||||||||| || |||| ||||| || Sbjct 627 TGGTGGATGCCTTGGCAGTAAGAGGCGATGAAGGACGTGATACTCTGCGTTAAGCCATGG 686 Query 69 GGAG-TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC 117 |||| |||| || | ||||||||| ||||||||||||||| ||||| Sbjct 687 GGAGCTGAG--AATAAGCTTTGATCCATGGATTTCCGAATGGGGCAACCC 734 >seq29417 Length=253 Score = 80.6 bits (88), Expect = 5e-13 Identities = 67/82 (82%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 167 CGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTA 226 ||| ||||||||||||||||||||| | |||| ||||| ||| | |||||| |||| Sbjct 253 CGGTGAACTGAAACATCTAAGTAGCCGGAGGAGGAGAAAACAAAAGTGATTCCGTGAGTA 194 Query 227 GTGGCGAGCGAAATGGGATGAG 248 ||||||||||||| |||| || Sbjct 193 GTGGCGAGCGAAAGCGGATTAG 172 >seq39530 Length=231 Score = 75.2 bits (82), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 5/126 (4%) Strand=Plus/Minus Query 195 AGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGATGA-GCCTTT 253 ||||||||| ||||||||||| ||| |||||||||||||||| ||| | ||| | Sbjct 231 AGGAAAAGACATCAACCGAGACTCCGTTAGTAGTGGCGAGCGAACGCGGACCAGGCCAGT 172 Query 254 ACGAGATAGTTGAATTGATAGTGGAATCCTCTGGAAATAGGAGCCATAGCGGGTGATAGC 313 | ||| | ||||| ||| ||| |||||||| |||||||||||||| ||| Sbjct 171 GCCTGAT-GGTGAAT---TAGCAGAACGATCTGGAAAGTTCGGCCATAGCGGGTGACAGC 116 Query 314 CCCGTA 319 |||||| Sbjct 115 CCCGTA 110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917397548032