Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq78207 84.2 3e-11 seq69987 84.2 3e-11 >seq78207 Length=1114 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 19331 GGGGAATTAGCTCAAC-GGTAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAAT 19389 |||| ||||||||| | || ||||||||||||||||||||||||||| | |||||||| Sbjct 874 GGGGGATTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCAACGGTTCGATC 815 Query 19390 CCGATATTCTCCA 19402 ||| ||| ||||| Sbjct 814 CCGTTATCCTCCA 802 >seq69987 Length=1764 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/73 (86%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 19331 GGGGAATTAGCTCAAC-GGTAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAAT 19389 |||| |||||||| | || ||||||||||||||||||||||||||| |||||||||| Sbjct 396 GGGGCCTTAGCTCAGCTGGGAGAGCACCTGCTTTGCAAGCAGGGGGTCATCGGTTCGATC 455 Query 19390 CCGATATTCTCCA 19402 |||||| ||||| Sbjct 456 CCGATAGGCTCCA 468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633214861248000