Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq358 583 3e-164 seq7 89.7 2e-15 >seq358 Length=1156 Score = 583 bits (646), Expect = 3e-164 Identities = 431/498 (87%), Gaps = 6/498 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 69 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 128 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||||||||||||||||||||||||| ||||||||||| || | Sbjct 129 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGTCTTGACATCCAGAGAATTTGC 188 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 ||||||||| | || |||||| | ||||||||| ||||||| ||||||||| Sbjct 189 TAGAGATAGCTTAGTGCC-TTCGGGA---ACTCTGACAGGTGCTGCATGGCTGTCGTCAG 244 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 245 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATTGTTAGTTGC 304 Query 241 CATCATTAAGTTGGGCACTCTAAGTT-GACTGCCGGTGA-CAAACCGGAGGAAGGTGGGG 298 |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 305 CATCATTAAGTTGGGCACTCTAAGGGAGACTGCCGGTGATCAAACCGGAGGAAGGTGGGG 364 Query 299 ACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAAT 358 | ||||||||||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct 365 ATGACGTCAAATCATCATGCCCCTTATGACCTGGGCTACACACGTGCTACAATGGATGGT 424 Query 359 ACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGAT 418 |||| | | |||| || | || || ||| |||| | |||| |||||||||||||| Sbjct 425 ACAACGAGTCGCGAGACAGTGATGTTTAGCTAATCTCTTAAAACCATTCTCAGTTCGGAT 484 Query 419 TGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCT 478 ||||| |||||||||| ||| |||||| ||||||||||||||||| |||||||| || Sbjct 485 TGTAGGCTGCAACTCGCCTACATGAAGTCGGAATCGCTAGTAATCGCGGATCAGCACGCC 544 Query 479 ACGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 545 GCGGTGAATACGTTCCCG 562 >seq7 Length=359230 Score = 89.7 bits (98), Expect = 2e-15 Identities = 153/218 (70%), Gaps = 13/218 (6%) Strand=Plus/Minus Query 283 CCGGAGGAAGGTGGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACG 342 ||| |||||||||| |||| ||||| |||||||| ||||||| ||||||||| || Sbjct 39482 CCGAAGGAAGGTGGCAACGAGGTCAAGTCATCATGGTTCTTATGACAAGGGCTACACCCG 39423 Query 343 TGCTACAATGGACAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGT 402 ||||||||| | || | |||| | ||| ||||| ||| || | | | Sbjct 39422 TGCTACAATTGCGCGTAAAGAGGGAAACGATCTGGCGAGAGTAAGGAACT------TACT 39369 Query 403 TGTTCT--CAGTTCGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTA 460 ||||| |||| | | || | |||| |||||||| |||||| | ||||| |||||| Sbjct 39368 GGTTCTGCCAGTCCAGGCTGGAATCTGGAACTCGACGCCATGAAGTTAGAATC-CTAGTA 39310 Query 461 ATCGTAGATCAGCA--TGCTACGGTGAATACGTTCCCG 496 |||| ||||||| | || ||||| ||||| ||| Sbjct 39309 ATCGCGAATCAGCAATTCGTA--GTGAACACGTTACCG 39274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503992946240