Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq250 116 3e-24 >seq250 Length=456 Score = 116 bits (128), Expect = 3e-24 Identities = 104/130 (80%), Gaps = 4/130 (3%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||||||||||||||| | |||||||||||||| | ||| Sbjct 241 TAGCTTTTATCCGTTGAGCGATGGCCCTTCCATGCGGTACCACCGGATCACTAAGTCCTA 300 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||| | |||||| |||||| ||||||||| |||||| ||||| || || |||| Sbjct 301 GTTTCCTACCTGCTCGAGTTGTAGCTCTCGCAGTCAAGCTGGCTTTTACCTTTACACT-- 358 Query 121 CACTACGATT 130 |||||||| Sbjct 359 --CTACGATT 366 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351998452300