Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq116 114 2e-23 seq103 78.8 2e-12 >seq116 Length=6426 Score = 114 bits (126), Expect = 2e-23 Identities = 161/224 (72%), Gaps = 8/224 (4%) Strand=Plus/Minus Query 103 GGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 ||||| | ||||||||||||||||||||||||||||||| |||||| ||||| | || Sbjct 6338 GGAAGATCAAGGCAATAACAGGTCTGTGATGCCCTTAGATAACCTGGGCTGCACGTGTGC 6279 Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAA-GGTCTGGGTAATCTTGTTA 221 |||| | ||| |||||||| ||| || || | | | | ||||| | | Sbjct 6278 TACAATAACATGCACAACGAGT-----ACCAATATCGAAACGATGTTGTGAATCT--TCA 6226 Query 222 AACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281 || ||| | ||||||| | ||| |||| | || | |||||||||| ||||| Sbjct 6225 AAGCGTGTTAAGGTGGGGATTGTCGGTTGTAATTGTCCGTCATAAACGAGGAATTCCTAG 6166 Query 282 TAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325 ||||||| ||||| | | | ||||||| |||||||||||||| Sbjct 6165 TAAGCGCAAGTCATTATCTTGAGTTGATTTCGTCCCTGCCCTTT 6122 >seq103 Length=6744 Score = 78.8 bits (86), Expect = 2e-12 Identities = 51/56 (91%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTG 169 |||||||||||||||||||||||||||| | |||||||||||||||||||| || Sbjct 4559 GCAATAACAGGTCTGTGATGCCCTTAGACATCTTGGGCCGCACGCGCGCTACAATG 4504 Score = 77.0 bits (84), Expect = 6e-12 Identities = 72/92 (78%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 237 GGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATC 296 |||||| | |||| ||||||| | || |||||||||| ||| |||| || ||||| Sbjct 4379 GGGATAAATGATTGGAATTATTTGTTTTGAACGAGGAATTCCTTGTAATATCGAGTCATT 4320 Query 297 AGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | | || | ||| ||||||||||||||||||| Sbjct 4319 AACTCGAGATGAATACGTCCCTGCCCTTTGTA 4288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947195557632