Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq250 116 1e-23 >seq250 Length=456 Score = 116 bits (128), Expect = 1e-23 Identities = 113/144 (78%), Gaps = 1/144 (1%) Strand=Plus/Plus Query 1 TCGACTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCC 60 |||| ||||| ||||||||||||||| ||| | | |||||||| | ||||| || Sbjct 314 TCGAGTTGTAGCTCTCGCAGTCAAGCTGGCTTTTACCTTTACACTCTACGATTGATTTCC 373 Query 61 AACCAGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAG 120 ||||| ||||| |||||||| ||||||||||||| ||| ||| ||| |||||||||| Sbjct 374 AACCAATCTGAGCCAACCTTTGAGCGCCTCCGTTACTCTTTAGGA-GGCGACCGCCCCAG 432 Query 121 TTAAACTACCCACCAGGCACTGTC 144 | ||||| || ||| ||||||| Sbjct 433 TCAAACTGTCCGTCAGACACTGTC 456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702392015744