Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq602 271 1e-70 seq65 93.3 7e-17 >seq602 Length=11255 Score = 271 bits (300), Expect = 1e-70 Identities = 179/198 (90%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct 2874 GTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGCG 2933 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 |||||||||||| || ||| || |||||| || ||| ||||||||||||||||||| Sbjct 2934 GGTGAACAATCCGACACTTGGGGACTTCTGCATCCCCATGGTAGGAAGAGCCGACATCGA 2993 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 ||||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||||| Sbjct 2994 AGGATCAAAAAGCTACGTCGCTAGGAACGCTTGGCAGCCACAAGACAGTTATCCCTGTGG 3053 Query 217 TAACTTTTCTGGCACCTC 234 ||||||||| | |||||| Sbjct 3054 TAACTTTTCGGACACCTC 3071 >seq65 Length=40740 Score = 93.3 bits (102), Expect = 7e-17 Identities = 115/154 (75%), Gaps = 4/154 (3%) Strand=Plus/Minus Query 62 GACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAA 121 |||||| | | ||||| ||||||||||||| ||||||||||||| || ||| || Sbjct 11876 GACGGTATCTATCCAGCCTACGTTCCCTATTAACGGGTGAACAATCCGACACTTGGGGAT 11817 Query 122 TTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCG--CTA 179 || ||| || |||||||||| ||| |||| || ||||||||| |||||| ||| Sbjct 11816 TTTTGCATCCCCATGATAGGAAAGGCCTACATTCAA-TTTCAAAAAGCCACGTCGCTCTA 11758 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTG 213 || |||| || ||| || | ||||||||| || Sbjct 11757 ACAATGCTTCGCAGCCGCACG-CAGTTATCCATG 11725 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854374513248