Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq602 120 9e-25 seq65 96.9 1e-17 >seq602 Length=11255 Score = 120 bits (132), Expect = 9e-25 Identities = 102/126 (81%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 42 GTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTC 101 |||| | | ||| || |||| || |||||| |||||| ||||| |||||||||||| | Sbjct 8377 GTATGTCTGGTCGCTGCCTCGCCTTGTCGGCATTGGGCAATTTTCGCGCCTGCTGCTAAC 8436 Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 | | | | | || ||| | |||||||| |||||||||||||||||| ||||||||||||| Sbjct 8437 CGTAGTTATAGTCGCCATCTCTCAGGCGCCCTCTCCGGAATCGAACTCTAATTCCCCGTT 8496 Query 162 ACCCGT 167 | |||| Sbjct 8497 ATCCGT 8502 Score = 82.4 bits (90), Expect = 2e-13 Identities = 120/164 (73%), Gaps = 8/164 (5%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT--CAAATAA 401 ||| ||||||||| || || || | ||||| |||| || || || ||| || Sbjct 8678 GCAAGTATTAGCTACAGCGTTTCCGTAGGTATCCTTGTAAAAA---ACAATTCCAAGTAG 8734 Query 402 ACGATAACTGATTTAATGAGCCATTCGCAGTTTC-ACTGTATAGATTGCT-TATACTTAG 459 | ||||||| ||||| ||||| ||||||||||| | | |||| | | ||||||| Sbjct 8735 ATTATAACTGTTTTAAGGAGCCGTTCGCAGTTTCGATTTTATATAAAAATCTATACTTTC 8794 Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 ||||||||||||| || || |||||| ||||| | |||||||| Sbjct 8795 GCATGCATGGCTTAGTCCTTTAGACAAACATAT-ATTACTGGCA 8837 >seq65 Length=40740 Score = 96.9 bits (106), Expect = 1e-17 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 42 GTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTC 101 |||| | | ||| || |||| || | || |||||| ||||| |||||||||||| | Sbjct 6105 GTATGTCTAGTCGCTGCCTCACCTCATTGGCATTGGGCAATTTTCGCGCCTGCTGCTAAC 6046 Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161 | | | | | || ||| | |||||||| || ||||||||||||||| ||||||||||||| Sbjct 6045 CGTAGTTATAGTCGCCATCTCTCAGGCACCTTCTCCGGAATCGAACTCTAATTCCCCGTT 5986 Query 162 ACCCGT 167 |||| Sbjct 5985 GTCCGT 5980 Score = 78.8 bits (86), Expect = 3e-12 Identities = 120/166 (72%), Gaps = 10/166 (6%) Strand=Plus/Minus Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT--CAAATA 400 |||| ||||||||| || ||| || | ||||| |||||| || || ||| || Sbjct 5807 AGCAAGTATTAGCTACAGCATTTCCGTAGGTATCC---TAGTAAAA-ACAATTCCAAGTA 5752 Query 401 AACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA---TAGATTGCTTATACTT 457 | ||||| | ||||| ||||| ||||||||||| | | || | ||||||| Sbjct 5751 GATTATAACGGTTTTAAGGAGCCGTTCGCAGTTTCGTTTTTAATTAAAAAATCTATACTT 5692 Query 458 AGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCA 503 ||||||||||||||||| || |||||| ||||| | |||||||| Sbjct 5691 TCACATGCATGGCTTAATCCTTTAGACAAACATAT-ATTACTGGCA 5647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510354944768