Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq4636 260 2e-67 >seq4636 Length=264 Score = 260 bits (288), Expect = 2e-67 Identities = 183/209 (88%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 85 TCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAG 144 |||||||| | ||||||||||||| || ||| || |||||| || ||||||||||| Sbjct 1 TCCCTATTGGCGGGTGAACAATCCGACACTTTGAGACTTCTGCGTCTCAATGATAGGAAG 60 Query 145 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 120 Query 205 TTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATC 264 ||||||||||||||||||||||| |||||||||| || |||| | |||||||||| Sbjct 121 TTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTGAAAGTTTCTCAGACCTAAAGGATC 180 Query 265 GATAGGCCACACTTTCATGGTTTGTATTC 293 ||||||||| |||||| |||||||||| Sbjct 181 GATAGGCCATGCTTTCACAGTTTGTATTC 209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854273027616