Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= AAMG01001182.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq8919 95.1 2e-17 >seq8919 Length=879 Score = 95.1 bits (104), Expect = 2e-17 Identities = 102/134 (76%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 74 CTTCCAGTACCTTCTGGTGACGACGTTGCAGCGAGCAATCGCGGTCGCCCAGGTGGATGG 133 || |||| ||||||||||| || |||||||||||||| ||||| ||||| || ||||| | Sbjct 172 CTCCCAG-ACCTTCTGGTGGCGGCGTTGCAGCGAGCAGTCGCGCTCGCCGAGATGGATCG 230 Query 134 CGTGGCCCTGGCCGTCGGACAGTACTTGCACTTCCACGTGACGTGGGTTGGTCAGGTACT 193 || ||| |||||||| || | || | || | ||| || || || |||||| | Sbjct 231 CGCCGCCGCGGCCGTCGCCGAGAATCTGGATCTCGATGTGGCGCGGCTTCTGCAGGTATT 290 Query 194 TTTCCAGGTAGACC 207 | |||||||||||| Sbjct 291 TCTCCAGGTAGACC 304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735894041070