Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30]
14,861 sequences; 67,701,403 total letters
Query= AAMG01001383.1
Length=561
Score E
Sequences producing significant alignments: (Bits) Value
seq9356 98.7 3e-18
seq10901 80.6 9e-13
>seq9356
Length=243
Score = 98.7 bits (108), Expect = 3e-18
Identities = 127/170 (75%), Gaps = 4/170 (2%)
Strand=Plus/Plus
Query 91 GACGAAGTTCTGCTCCGTGAGGACGGCCATCTGACTTAGATAATTTAAGGACGCCT-CAC 149
||||||||||||| ||| || |||||||||| || | ||| | | | ||| | |||
Sbjct 62 GACGAAGTTCTGCACCGCCAGCCCGGCCATCTGGCTGAAATAGCTGAGAG-CGCTTTCAC 120
Query 150 CGCTGTTGTTCTGCCAGTTGGTATTGGTCATGAAACTGACGGCGGTATTAAACGCCTAGG 209
|||||| | |||||||||||| ||||| | ||| ||||||||||| || | ||| ||
Sbjct 121 CGCTGTAGGCCTGCCAGTTGGTGTTGGTGACGAAGCTGACGGCGGTGTTGAGTGCC-AGA 179
Query 210 T-CCATTCCTGGCCCGGCAGGTTTTGCGGGTTCAGCGGGAGGGAGCCTTG 258
| ||| ||||||| | | ||||||||| ||||| || ||||| ||
Sbjct 180 TCCCAGGAGAGGCCCGGGAAGCCTTGCGGGTTGAGCGGCAGCGAGCCCTG 229
>seq10901
Length=1277
Score = 80.6 bits (88), Expect = 9e-13
Identities = 131/184 (71%), Gaps = 6/184 (3%)
Strand=Plus/Plus
Query 78 CTGTCGCGTTGTTGAC--GAAGTTCTGCTCCGTGAGGACGGCCATCTGACTTAGATAATT 135
|||||||| | |||| |||||||||| | | | | ||||||||||| | ||| |
Sbjct 123 CTGTCGCG--GCTGACAGGAAGTTCTGCACTGCCAATCCCGCCATCTGACTGAAATAGCT 180
Query 136 TAAGGACGCCTCACCGCTGTTGTTCTGCCAGTTGGTATTGGTCATGAAACTGACGGCGGT 195
| | |||||||||| | |||||||||||| ||||| | || || ||||||||
Sbjct 181 GAGTGTGCTTTCACCGCTGTAGGCCTGCCAGTTGGTGTTGGTGACAAAGCTAACGGCGGT 240
Query 196 ATTAAACGCCTAGGT-CCATTCCTGGCCCGGCAGGTTTTGCGGGTTCAGCGGGAGGGAGC 254
||| |||||| || | ||| | |||| || | | |||||||| || || || || |
Sbjct 241 ATTGAACGCC-AGATCCCAGGACAGGCCGGGGAAGCCCTGCGGGTTAAGTGGCAGTGAAC 299
Query 255 CTTG 258
||||
Sbjct 300 CTTG 303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1692548432992
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |