Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= AAMG01001435.1 Length=587 Score E Sequences producing significant alignments: (Bits) Value seq2867 154 5e-35 >seq2867 Length=368 Score = 154 bits (170), Expect = 5e-35 Identities = 180/243 (74%), Gaps = 0/243 (0%) Strand=Plus/Minus Query 1 TCGATGTACGGCGGTGGTTTTGCCACGGTTCCGGCTTACCTGGCCGACCTGTTCGGTACG 60 |||||||| ||||| || |||||||| || ||||| || || |||||| ||||||| || Sbjct 255 TCGATGTATGGCGGCGGCTTTGCCACCGTGCCGGCCTATCTTGCCGACATGTTCGGCACC 196 Query 61 CAGATGGTCGGTGCGATCCACGGTCGCCTGCTGACCGCCTGGGCAGCGGCGGGCGTCTTG 120 ||| | ||||| ||||| || || ||||||||||| || ||| | | |||||| || | Sbjct 195 CAGTTCGTCGGCGCGATTCATGGCCGCCTGCTGACGGCATGGTCGACCGCGGGCATCATC 136 Query 121 GGCCCGGTGTTGGTGAACTATCTGCGTGAGTATCAGTTGAGCATCGGCGTTGAACGCGCT 180 || |||||| ||||||||||||||||||||| ||| || | ||||| |||| Sbjct 135 GGTCCGGTGGTGGTGAACTATCTGCGTGAGTTCCAGCTGGCCGCGGGCGTGCCGCGCGAC 76 Query 181 GCGGCCTATGACATCACCTTGTACATCCTCGCTGGCCTGCTGGTGCTGGGGTTCATCTGC 240 | ||| ||| ||| |||||||||| | | ||||| | || ||||||||| Sbjct 75 CAGCTCTACAACACCACGATGTACATCCTGTGCGCCATGCTGATCGCCGGCTTCATCTGC 16 Query 241 AAC 243 ||| Sbjct 15 AAC 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1775736068640