Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq4127 250 6e-64 >seq4127 Length=580 Score = 250 bits (276), Expect = 6e-64 Identities = 203/246 (83%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 1 CGACGGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGC 60 ||||||||| ||| |||||||||| ||| ||||||||||||||||||| ||||| || Sbjct 103 CGACGGCACTGGCCCGGTGTGGAAAGGCTCGGTGTTCCCGTTCCTGTTCATTACCATCGC 162 Query 61 CTGTGGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCT 120 ||||||||| || || || ||||||||||||||| |||| ||||||||||| ||| || | Sbjct 163 CTGTGGCGCCGTGTCCGGCTTCCATGCGCTGATCGCCTCCGGCACCACGCCGAAGCTGTT 222 Query 121 CGCCAGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGT 180 |||| ||||| | || || | ||||||||||||| ||||||||||| || ||||| Sbjct 223 GGCCAATGAGAAAGACGCACGCTTTATCGGTTACGGCGCGATGCTGATGGAATCCTTCGT 282 Query 181 GGCCATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAA 240 |||||||||||| |||||||||| || | || || || ||| |||||||||||||||| Sbjct 283 TGCCATCATGGCGCTGGTTGCCGCGTCCATCATCGAACCTGGCCTGTACTTCGCCATGAA 342 Query 241 CAGCCC 246 || ||| Sbjct 343 CACCCC 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161427374624