Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq4615 95.1 2e-17 >seq4615 Length=1071 Score = 95.1 bits (104), Expect = 2e-17 Identities = 143/198 (72%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 6 TGGATCACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGCTGGCC 65 ||||| || |||||||| | | ||| ||||||| ||| || | ||||| | ||| | Sbjct 541 TGGATTACGTGCTGGAATTTGACGTGCCAGACGAACTGATCGTTGATCGTATCG-TGGTC 599 Query 66 GTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGGTTG 125 |||||||||| | | || ||||||||||| ||| | ||||||||| | ||| | Sbjct 600 GTCGCGTACATGCGCCTTCTGGCCGCGTGTATCACGTTAAATTCAATCCGCCCA-GGTGG 658 Query 126 CAGGCAAGGACGATGTGACCGGCGAAGACCTGGT-ACAGCGCAAGGACGACACCGAAGAA 184 ||| || || || |||||||| ||||| ||| ||| || || ||||| |||||| Sbjct 659 AAGGTAAAGATGACGTGACCGGTGAAGAGCTGACGACA-CGTAAAGACGATCAGGAAGAA 717 Query 185 ACCGTTCGTCACCGCCTG 202 ||||| ||| | || ||| Sbjct 718 ACCGTACGTAAACGTCTG 735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899066369888