Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq13857 138 3e-30 >seq13857 Length=497 Score = 138 bits (152), Expect = 3e-30 Identities = 184/249 (74%), Gaps = 10/249 (4%) Strand=Plus/Minus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||||||||||||||||||||||| |||||||||||| || || || |||||| | Sbjct 448 CGATGGTCAGCAACTCGCCGCCCACCTCGGTCCACGCCAGACCGGTCACGACACCGACCT 389 Query 61 GATCCT-GCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGG 119 | |||| |||| ||| | |||| ||| | || ||||||||||||| | ||| | Sbjct 388 GGTCCTCGCTG-TCGATCTCGCCGAAGCGATACTTCGGCACGCCGAGGAACTCCTCGA-C 331 Query 120 GAGTCGGCC---GTGACCTTCACCGAGAAGCGTTTTTCCAGCGCAT--GTTCCTTGACCG 174 | || ||| || ||||||||| || || || || ||| | ||||| |||| Sbjct 330 CATTCAGCCTCGGTCACCTTCACC--GACTTCTTCTTGGAGATCATCAGCTCCTTCACCG 273 Query 175 CCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGT 234 |||||||| || ||| |||| ||||| ||| |||||| || ||||||||||||| Sbjct 272 CCTTGCGGGCGAGTGTCGAAATCTCACGCTCGAGGTTACGCACGCCCGCTTCGCGGGTGT 213 Query 235 AGTAGCGGA 243 || ||||| Sbjct 212 AGCGGCGGA 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158227850176