Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq5841 116 3e-24 >seq5841 Length=606 Score = 116 bits (128), Expect = 3e-24 Identities = 110/139 (79%), Gaps = 1/139 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 328 TACCTTTTATCCGTTGAGCGATGGCCCTTCCACGAGGGACCACCGGATCACTATGACCGA 387 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| ||||||| | |||| ||||||| ||| || ||| |||||||||||| | Sbjct 388 CTTTCGTCTCTGCTCGACTTGTCAGTCTCGCAGTCAGGCTGGCTTATGCCATTGCACTCT 447 Query 121 CAC-TACGATTTCCGACCG 138 || || ||||| |||| Sbjct 448 AACAGCCGGTTTCCAACCG 466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351950958700