Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq5841 131 2e-28 >seq5841 Length=606 Score = 131 bits (144), Expect = 2e-28 Identities = 125/158 (79%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||| | |||||||||||||||||||| |||||| ||| Sbjct 340 GTTGAGCGATGGCCCTTCCACGAGGGACCACCGGATCACTATGACCGACTTTCGTCTCTG 399 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCA--CTAACCTCACGATG 141 ||||| |||| ||||||||||| || ||||||||||||||| ||||| | || | Sbjct 400 CTCGACTTGTCAGTCTCGCAGTCAGGCTGGCTTATGCCATTGCACTCTAACAGC-CGGTT 458 Query 142 TCCGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||| |||| | ||| ||||||| || ||||||||| Sbjct 459 TCCAACCGGCCTGAGCCAACCTTCGCGCGCCTCCGTTA 496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473531817732