Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000258005.2_202014-06-30] 14,861 sequences; 67,701,403 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq7774 86.0 1e-14 >seq7774 Length=508 Score = 86.0 bits (94), Expect = 1e-14 Identities = 147/212 (69%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 78 CTATCCAACCTGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCG 137 ||||||| | ||||| | || | ||||||||| | | || || || || ||||| | | Sbjct 28 CTATCCACCTTGAGCGCGGCGATGAAGGCTTCCT-GCGGGATGTCGACCTTGCCGAACTG 86 Query 138 CTTCATGCGTTTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTC 197 | ||| || || || |||| |||||||| || |||||||| || || | | ||| Sbjct 87 CCGCATCTTCTTCTTGCCTTCCTTCTGCTTCTCCAGAAGCTTGCGTTTGCGCGTGATGTC 146 Query 198 ACCGCCGTAGCATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAAT 257 ||||||||||| || || |||| ||| | || || ||||| ||||| || Sbjct 147 GCCGCCGTAGCACTTCGCGGTGACGTCCTTGCGCAGCGCGCGGACGGTTTCGCGCGCGAT 206 Query 258 GATCTGCCCGCCAATGGCGGCCTGGATCGCGA 289 | || ||||| || || |||||||||| || Sbjct 207 CACCTTGCCGCCGATCGCCGCCTGGATCGGGA 238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838275405376