Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq637 282 6e-74 >seq637 Length=5243 Score = 282 bits (312), Expect = 6e-74 Identities = 204/232 (88%), Gaps = 3/232 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| || ||| |||| | ||||| |||| ||||||| ||| | Sbjct 3768 GTACAAAGGGCAGGGACGTAATCGGCGCAAGCT-GCTGACTTGCGCCTACTAGGCATT-C 3825 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| || ||||||||| ||||||||||||||||||| | ||| |||||| Sbjct 3826 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGATGCATACTCACAAGATT 3885 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||| ||||| ||||||||||| ||| |||||||| || |||||||||||||||||||| Sbjct 3886 ACCTAGACCTATCGGCCAAGGTTATAAACTCGTTGGATGCATCAGTGTAGCGCGCGTGCA 3945 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTG 231 ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3946 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTG 3997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751735117400