Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq637 266 6e-69 >seq637 Length=5243 Score = 266 bits (294), Expect = 6e-69 Identities = 214/255 (84%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 66 CCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG--CTCGAATACA 123 |||||||||||||||||| |||||||||||||| |||||||| | | || |||||| Sbjct 4666 CCAGGACTTTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGGCTTGTCGCCTTGAATACT 4607 Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183 |||||||||||||| |||||| | ||| |||||||||||||||||||||| | | Sbjct 4606 GCAGCATGGAATAATAAGATAGGATTT-CGGCCCTATTTTGTTGGTTTCTAGGACTGAAG 4548 Query 184 TAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTG 243 |||||||||||||||| || ||||| | ||||| || ||||||||||||||||||| Sbjct 4547 TAATGATTAATAGGGACGGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTTA 4488 Query 244 GATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTG 303 ||||| || ||||| ||||||||||||||| || |||| ||||||||||||||||| | Sbjct 4487 GATTTGTTAAAGACGAACTACTGCGAAAGCATTTGCCAAAGATGTTTTCATTAATCA-AG 4429 Query 304 AACGAAAGTTAGGGG 318 ||||||||||||||| Sbjct 4428 AACGAAAGTTAGGGG 4414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914867233280