Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq20158 82.4 2e-13 seq21181 77.0 8e-12 >seq20158 Length=345 Score = 82.4 bits (90), Expect = 2e-13 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 79 TTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTA 138 ||||||||||||||| || || ||||| ||||||||||||| |||||| ||||| ||| Sbjct 17 TTCGTGCAGGTCGGAGCTCACTCGACACTGAATTTCGCTACCGTAGGACTGTTATAGTTG 76 Query 139 CGGCCGCCGT 148 | |||||||| Sbjct 77 CAGCCGCCGT 86 >seq21181 Length=1253 Score = 77.0 bits (84), Expect = 8e-12 Identities = 60/72 (83%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 89 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTTACGGCCGCCGT 148 ||||||||| |||||||| | || ||||||||||||||| ||||| ||||| || |||| Sbjct 828 TCGGAACTTTCCCGACAATGCATGTCGCTACCTTAGGACAGTTATAGTTACATCCACCGT 769 Query 149 TTACCGGGGCTT 160 |||| | |||| Sbjct 768 TTACTAGAGCTT 757 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260341573120