Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq21181 87.8 4e-15 seq20158 84.2 5e-14 >seq21181 Length=1253 Score = 87.8 bits (96), Expect = 4e-15 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 83 TCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGT 142 ||||||||| |||||||| | || ||||||||||||||| ||||||||||| || |||| Sbjct 828 TCGGAACTTTCCCGACAATGCATGTCGCTACCTTAGGACAGTTATAGTTACATCCACCGT 769 Query 143 TTACTGGGGCTTA 155 ||||| | ||||| Sbjct 768 TTACTAGAGCTTA 756 >seq20158 Length=345 Score = 84.2 bits (92), Expect = 5e-14 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 72 TTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTT 131 |||||||| ||||||| || || ||||| ||||||||||||| |||||| ||||||||| Sbjct 16 TTTCGTGCAGGTCGGAGCTCACTCGACACTGAATTTCGCTACCGTAGGACTGTTATAGTT 75 Query 132 ACGGCCGCCGT 142 | |||||||| Sbjct 76 GCAGCCGCCGT 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062013711360