Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hammondia_20hammondi_20[genbank_20GCA_5F000447165.1_202013-08-13] 36,360 sequences; 51,498,142 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq637 150 2e-34 >seq637 Length=5243 Score = 150 bits (166), Expect = 2e-34 Identities = 149/189 (79%), Gaps = 4/189 (2%) Strand=Plus/Minus Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTG--CTCGAATACA 62 |||||||||||||||||| |||||||||| ||| |||||||| | | || |||||| Sbjct 4666 CCAGGACTTTTACTTTGAGAAAATTAGAGTGTTTCAAGCAGGCTTGTCGCCTTGAATACT 4607 Query 63 TTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCC 122 | |||||||||||| |||||| | ||| ||||||||| |||||||||||| | Sbjct 4606 GCAGCATGGAATAATAAGATAGGATTT-CGGCCCTATTTTGTTGGTTTCTAGGACTGAA- 4549 Query 123 GTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTT 182 |||||||| |||| ||| || ||||| | ||||| || ||||| ||||||||||||| Sbjct 4548 GTAATGATTAATAGGGACGGTTGGGGGCATTCGTATTTAACTGTCAGAGGTGAAATTCTT 4489 Query 183 GGATTTATT 191 ||||| || Sbjct 4488 AGATTTGTT 4480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511819654400